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The map label for this gene is rplX

Identifier: 124028444

GI number: 124028444

Start: 1604185

End: 1604448

Strand: Direct

Name: rplX

Synonym: Hbut_1600

Alternate gene names: 124028444

Gene position: 1604185-1604448 (Clockwise)

Preceding gene: 124028443

Following gene: 124028445

Centisome position: 96.22

GC content: 53.79

Gene sequence:

>264_bases
ATGGGAGAGGTAAAGTTCTACCTGGTTGAGGGCAGGATGCTGATAAGACACGACCGGATGCCGGAATGGTGGAAGTTTAG
GAAGTATGTGCGTGCGCTAAAGCCAGAGCACGCCGTGGAGAAGGTTCTGTCGGAGCTTGGCAGCAACCACAAGGTTAAGA
GGTATCACGTCAAGATAGAGCGTGTAGTCGAGGTGCCACCGGAGGAGGTGCCCGACCGCACACTACTAGTGCTAGCAAGT
CTTACAAGGTGGGTTAAGCCTTGA

Upstream 100 bases:

>100_bases
GCACTCGTTGGGGATGAAACTACTGGCCCGGAACTTATGCGTATCCAGCAAGCCTTAAGATTAAGAGGCTAGCCTGCCAC
TGCAGGCTCGGGGGAGGGGT

Downstream 100 bases:

>100_bases
GCCAAGCAGGGCAGAGCAGCAGGACTATAACGCTCGAGGAGGCGTTGGAACAACTATCCCTCCTCGAGTCCCAACTCAAC
CAGCTCCAGGCAACGATACG

Product: 50S ribosomal protein LX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MGEVKFYLVEGRMLIRHDRMPEWWKFRKYVRALKPEHAVEKVLSELGSNHKVKRYHVKIERVVEVPPEEVPDRTLLVLAS
LTRWVKP

Sequences:

>Translated_87_residues
MGEVKFYLVEGRMLIRHDRMPEWWKFRKYVRALKPEHAVEKVLSELGSNHKVKRYHVKIERVVEVPPEEVPDRTLLVLAS
LTRWVKP
>Mature_86_residues
GEVKFYLVEGRMLIRHDRMPEWWKFRKYVRALKPEHAVEKVLSELGSNHKVKRYHVKIERVVEVPPEEVPDRTLLVLASL
TRWVKP

Specific function: Unknown

COG id: COG2157

COG function: function code J; Ribosomal protein L20A (L18A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein LX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLX_HYPBU (A2BN58)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013764.1
- ProteinModelPortal:   A2BN58
- SMR:   A2BN58
- STRING:   A2BN58
- GeneID:   4781489
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_1600
- eggNOG:   arNOG18293
- HOGENOM:   HBG733155
- OMA:   KYVRALN
- ProtClustDB:   PRK00773
- BioCyc:   HBUT415426:HBUT_1600-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00273
- InterPro:   IPR021138
- InterPro:   IPR002768
- ProDom:   PD010302

Pfam domain/function: PF01775 Ribosomal_L18ae

EC number: NA

Molecular weight: Translated: 10462; Mature: 10330

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEVKFYLVEGRMLIRHDRMPEWWKFRKYVRALKPEHAVEKVLSELGSNHKVKRYHVKIE
CCCEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHH
RVVEVPPEEVPDRTLLVLASLTRWVKP
HHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GEVKFYLVEGRMLIRHDRMPEWWKFRKYVRALKPEHAVEKVLSELGSNHKVKRYHVKIE
CCEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHH
RVVEVPPEEVPDRTLLVLASLTRWVKP
HHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA