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The map label for this gene is 124028440

Identifier: 124028440

GI number: 124028440

Start: 1602497

End: 1602850

Strand: Direct

Name: 124028440

Synonym: Hbut_1596

Alternate gene names: NA

Gene position: 1602497-1602850 (Clockwise)

Preceding gene: 124028439

Following gene: 124028441

Centisome position: 96.12

GC content: 50.56

Gene sequence:

>354_bases
GTGTCCGAGTACGACATCTATGATGCCGAGCTTGAAGAGATTAAGAGGCGGAAGCTGCTAGAGCTGCAGAGAAGGCTGCA
AATGGAAGAGGAGCTCCGGAGGAGACAGCAAGAGGAGGCTGCAAGAAGGGAGGCACTTCTACGCGCTATACTCACACCAG
AGGCTAGGGAGAGACTTGCAAACGTTAGGCTCGTAAGGCCTGAGCTAGCAAAGATTGTTGAGGACAATATTATAGCACTA
GTGCAGTCTGGCCAGCTAAGACCACCTGTTAGCGATGAGGTCGTCAAGCGTATCCTCGAGGCAATATACGAGAGGACACA
CCGAGAGACACGTATAAGGATTAAAAGAAAGTAG

Upstream 100 bases:

>100_bases
TTGCCGAGAAGAATCCCGAGCTAAGGAAGTACCTTAGCTAGCGAGGGTAGAGGATAATAATGGAAATGCAGGAGGAAACC
AGGGGTAGGGGGTGGCGGCA

Downstream 100 bases:

>100_bases
CCCATGTCAACCGCAGCGGGGGGCCGAAGAGGCTATGGCACACTTTAAGCCTCTGGGTAAAAAGCTACGTCTAGCTAAGG
CGCTCAAACAGAACCGCTCT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSEYDIYDAELEEIKRRKLLELQRRLQMEEELRRRQQEEAARREALLRAILTPEARERLANVRLVRPELAKIVEDNIIAL
VQSGQLRPPVSDEVVKRILEAIYERTHRETRIRIKRK

Sequences:

>Translated_117_residues
MSEYDIYDAELEEIKRRKLLELQRRLQMEEELRRRQQEEAARREALLRAILTPEARERLANVRLVRPELAKIVEDNIIAL
VQSGQLRPPVSDEVVKRILEAIYERTHRETRIRIKRK
>Mature_116_residues
SEYDIYDAELEEIKRRKLLELQRRLQMEEELRRRQQEEAARREALLRAILTPEARERLANVRLVRPELAKIVEDNIIALV
QSGQLRPPVSDEVVKRILEAIYERTHRETRIRIKRK

Specific function: Unknown

COG id: COG2118

COG function: function code R; DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PDCD5 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022889
- InterPro:   IPR002836 [H]

Pfam domain/function: PF01984 dsDNA_bind [H]

EC number: NA

Molecular weight: Translated: 14111; Mature: 13979

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYDIYDAELEEIKRRKLLELQRRLQMEEELRRRQQEEAARREALLRAILTPEARERLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
NVRLVRPELAKIVEDNIIALVQSGQLRPPVSDEVVKRILEAIYERTHRETRIRIKRK
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEYDIYDAELEEIKRRKLLELQRRLQMEEELRRRQQEEAARREALLRAILTPEARERLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
NVRLVRPELAKIVEDNIIALVQSGQLRPPVSDEVVKRILEAIYERTHRETRIRIKRK
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA