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The map label for this gene is rps19e [H]

Identifier: 124028439

GI number: 124028439

Start: 1601976

End: 1602437

Strand: Direct

Name: rps19e [H]

Synonym: Hbut_1595

Alternate gene names: 124028439

Gene position: 1601976-1602437 (Clockwise)

Preceding gene: 124028438

Following gene: 124028440

Centisome position: 96.09

GC content: 56.49

Gene sequence:

>462_bases
ATGGTTACAGCGCTAGAGGTTCCAGCGGATCTGCTCATAAAGCGCGTAGCTGAGAAGCTGAAGAAGATGCCCCAGATAAG
ACCGCCAGCATGGGCCTACTATGTGAAGACCGGCGTGCACAAGGAGAGACCACCAGAGGACCCTGACTGGTGGTATTATA
GGGCAGCTTCTATACTCCGGAAGCTCTACAAGCGCGGCACCCCCGTAGGTGTTGAGAGGCTACGCACCGCCTACGGCGGC
CGCATGAACCGCGGCGTAGCTCCAGAACACTTTGCCAAGGGCTCCGGCTCGATTATCAGGAAGATACTACAACAGCTTGA
GAGAGCTGGACTCGTTGTAAGGGTTAGGGGCAAGGGCCGCACGCTAAGCCCGAGGGGCCGCAGTCTACTCGACAACACCG
CCTACGAGATAATGAAAGAGCTTGCCGAGAAGAATCCCGAGCTAAGGAAGTACCTTAGCTAG

Upstream 100 bases:

>100_bases
TTGTCCTCTACCGCCCCGAGCCGCAAACTAGAAAGTCTCGGAGTAGTGGTGGAGCTGATAAAAAGGCCTCAGCAAGTGTG
GGCTCAGCGGGGAGGCGGAG

Downstream 100 bases:

>100_bases
CGAGGGTAGAGGATAATAATGGAAATGCAGGAGGAAACCAGGGGTAGGGGGTGGCGGCAGTGTCCGAGTACGACATCTAT
GATGCCGAGCTTGAAGAGAT

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MVTALEVPADLLIKRVAEKLKKMPQIRPPAWAYYVKTGVHKERPPEDPDWWYYRAASILRKLYKRGTPVGVERLRTAYGG
RMNRGVAPEHFAKGSGSIIRKILQQLERAGLVVRVRGKGRTLSPRGRSLLDNTAYEIMKELAEKNPELRKYLS

Sequences:

>Translated_153_residues
MVTALEVPADLLIKRVAEKLKKMPQIRPPAWAYYVKTGVHKERPPEDPDWWYYRAASILRKLYKRGTPVGVERLRTAYGG
RMNRGVAPEHFAKGSGSIIRKILQQLERAGLVVRVRGKGRTLSPRGRSLLDNTAYEIMKELAEKNPELRKYLS
>Mature_153_residues
MVTALEVPADLLIKRVAEKLKKMPQIRPPAWAYYVKTGVHKERPPEDPDWWYYRAASILRKLYKRGTPVGVERLRTAYGG
RMNRGVAPEHFAKGSGSIIRKILQQLERAGLVVRVRGKGRTLSPRGRSLLDNTAYEIMKELAEKNPELRKYLS

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=136, Percent_Identity=40.4411764705882, Blast_Score=100, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17508697, Length=133, Percent_Identity=44.3609022556391, Blast_Score=107, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6324027, Length=140, Percent_Identity=38.5714285714286, Blast_Score=88, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6324451, Length=140, Percent_Identity=38.5714285714286, Blast_Score=88, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24649452, Length=144, Percent_Identity=42.3611111111111, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI17647891, Length=137, Percent_Identity=43.0656934306569, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24642576, Length=137, Percent_Identity=43.0656934306569, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24642574, Length=137, Percent_Identity=43.0656934306569, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 17541; Mature: 17541

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: PS00628 RIBOSOMAL_S19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTALEVPADLLIKRVAEKLKKMPQIRPPAWAYYVKTGVHKERPPEDPDWWYYRAASILR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
KLYKRGTPVGVERLRTAYGGRMNRGVAPEHFAKGSGSIIRKILQQLERAGLVVRVRGKGR
HHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCC
TLSPRGRSLLDNTAYEIMKELAEKNPELRKYLS
EECCCCHHHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MVTALEVPADLLIKRVAEKLKKMPQIRPPAWAYYVKTGVHKERPPEDPDWWYYRAASILR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
KLYKRGTPVGVERLRTAYGGRMNRGVAPEHFAKGSGSIIRKILQQLERAGLVVRVRGKGR
HHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCC
TLSPRGRSLLDNTAYEIMKELAEKNPELRKYLS
EECCCCHHHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]