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The map label for this gene is 124028415

Identifier: 124028415

GI number: 124028415

Start: 1579379

End: 1579867

Strand: Reverse

Name: 124028415

Synonym: Hbut_1569

Alternate gene names: NA

Gene position: 1579867-1579379 (Counterclockwise)

Preceding gene: 124028425

Following gene: 124028412

Centisome position: 94.76

GC content: 51.53

Gene sequence:

>489_bases
TTGAGGCGATGGCAGCTATCAAAGAGGGATAAGAAGCGTCTACTTGAGAAGCTTGCAGAGACTTATCCAGGACTAAGCGT
GGGCGAGCTACGCGATGCTAGGATAGAGAAGCTCGTAGAGGATGATGTTGAGATGTATATTGTTGATAGTCTCCCAGCAT
TCATAGAGGCTGGTGAGAGGTTTGTGCCACACCTGCTATACCTGCTGCGCCGCGGCTATAGCTGGCTCCCATACATAGTA
GTGGATGAGGGTGCTGTCAAGCCGATTTCTAGAGGTGCAGACCTCATGAGGCCGGGTATTGTCGAGGTCGTGGGGGAGTT
TTCGCCAGGCGACATTGTGGTTATTGTGGAGCCTAGCCGTAGGTTACCCCTAGCTGTACATGAGGCTCTAATCTCTAGCA
AGGATATTCCTGGTATGGAGAAGGGCAGGGTTTCGAGAAGGCTCCACTACGTGGGTGACAGGTACTGGAAAATAGCTGAG
AGGCTATGA

Upstream 100 bases:

>100_bases
ACGGTGTGTTGTCTCAGCCATTCCGCGCACCCCGCGAGGCCCTATCCCCCAGGGGCTTTATAGGAGATTCTCCTAGCCCC
TCATACCGGGTTGATGGTTG

Downstream 100 bases:

>100_bases
GTACTAGGCTACACCGGCAATATGGAGGGTGTCAAGTATCGTTGGTGTGTAGACTCTGATGTCTTCGGGAAGACCTAGAT
GGCGGGCTCTACGCCTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRRWQLSKRDKKRLLEKLAETYPGLSVGELRDARIEKLVEDDVEMYIVDSLPAFIEAGERFVPHLLYLLRRGYSWLPYIV
VDEGAVKPISRGADLMRPGIVEVVGEFSPGDIVVIVEPSRRLPLAVHEALISSKDIPGMEKGRVSRRLHYVGDRYWKIAE
RL

Sequences:

>Translated_162_residues
MRRWQLSKRDKKRLLEKLAETYPGLSVGELRDARIEKLVEDDVEMYIVDSLPAFIEAGERFVPHLLYLLRRGYSWLPYIV
VDEGAVKPISRGADLMRPGIVEVVGEFSPGDIVVIVEPSRRLPLAVHEALISSKDIPGMEKGRVSRRLHYVGDRYWKIAE
RL
>Mature_162_residues
MRRWQLSKRDKKRLLEKLAETYPGLSVGELRDARIEKLVEDDVEMYIVDSLPAFIEAGERFVPHLLYLLRRGYSWLPYIV
VDEGAVKPISRGADLMRPGIVEVVGEFSPGDIVVIVEPSRRLPLAVHEALISSKDIPGMEKGRVSRRLHYVGDRYWKIAE
RL

Specific function: Unknown

COG id: COG2016

COG function: function code J; Predicted RNA-binding protein (contains PUA domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320844, Length=168, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022430
- InterPro:   IPR015266
- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR016437
- InterPro:   IPR004521 [H]

Pfam domain/function: PF01472 PUA [H]

EC number: NA

Molecular weight: Translated: 18625; Mature: 18625

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWQLSKRDKKRLLEKLAETYPGLSVGELRDARIEKLVEDDVEMYIVDSLPAFIEAGER
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCHH
FVPHLLYLLRRGYSWLPYIVVDEGAVKPISRGADLMRPGIVEVVGEFSPGDIVVIVEPSR
HHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCHHHHCCCHHHHHCCCCCCCEEEEECCCC
RLPLAVHEALISSKDIPGMEKGRVSRRLHYVGDRYWKIAERL
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRWQLSKRDKKRLLEKLAETYPGLSVGELRDARIEKLVEDDVEMYIVDSLPAFIEAGER
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCHH
FVPHLLYLLRRGYSWLPYIVVDEGAVKPISRGADLMRPGIVEVVGEFSPGDIVVIVEPSR
HHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCHHHHCCCHHHHHCCCCCCCEEEEECCCC
RLPLAVHEALISSKDIPGMEKGRVSRRLHYVGDRYWKIAERL
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]