Click here to switch to the map view.

The map label for this gene is 124028398

Identifier: 124028398

GI number: 124028398

Start: 1563041

End: 1563394

Strand: Reverse

Name: 124028398

Synonym: Hbut_1552

Alternate gene names: NA

Gene position: 1563394-1563041 (Counterclockwise)

Preceding gene: 124028399

Following gene: 124028397

Centisome position: 93.78

GC content: 54.24

Gene sequence:

>354_bases
TTGAAGAGCTACGCCGCCTCGGGGCAGACATCTAGCTGCACCGGGTATAGCCTATCTGCGAAGCTGTATAGGCTGGTATT
CACAGCCCACGCTAGAAAGAGGATGGCAGAACGTGGCATAAGTACTAGGGAAGTCGTTGAAGCCCTGGAGGCGCCGGTGC
AGCTGGTCTACGACCGTTTGCGCGACGTACATCTAGCACTTGGACATAACGATGTAGCAGTAGTATATGCCGTAAGGGGG
CTCATCGTCGAGATAGTAACTGTTATGCGTAGAAAAAGATTACGAGGCACTGCTGGGCAGGCTAGGCCCGCGACGATACC
GAGTACTCTGTTAGATCGAGTGCGCCACGGCTAA

Upstream 100 bases:

>100_bases
TCAGCCGATGGCAAAGCCCCGGCTCCGCGCCAGCTTGTAGAGGAGATGCTCGCCGAATACTATAGGGCTAGGGGCCTTGA
TGCCGAGGGAAGGGTGAAGC

Downstream 100 bases:

>100_bases
GTGGCCTGGTGGCAGCGGTGTGGTCGAACCGAAAACAATTATAGCATGTCATTAACAGTAATACCTACGGGTTTACAGTC
TACAGCAAAGGGTAACCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKSYAASGQTSSCTGYSLSAKLYRLVFTAHARKRMAERGISTREVVEALEAPVQLVYDRLRDVHLALGHNDVAVVYAVRG
LIVEIVTVMRRKRLRGTAGQARPATIPSTLLDRVRHG

Sequences:

>Translated_117_residues
MKSYAASGQTSSCTGYSLSAKLYRLVFTAHARKRMAERGISTREVVEALEAPVQLVYDRLRDVHLALGHNDVAVVYAVRG
LIVEIVTVMRRKRLRGTAGQARPATIPSTLLDRVRHG
>Mature_117_residues
MKSYAASGQTSSCTGYSLSAKLYRLVFTAHARKRMAERGISTREVVEALEAPVQLVYDRLRDVHLALGHNDVAVVYAVRG
LIVEIVTVMRRKRLRGTAGQARPATIPSTLLDRVRHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12933; Mature: 12933

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYAASGQTSSCTGYSLSAKLYRLVFTAHARKRMAERGISTREVVEALEAPVQLVYDRL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RDVHLALGHNDVAVVYAVRGLIVEIVTVMRRKRLRGTAGQARPATIPSTLLDRVRHG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKSYAASGQTSSCTGYSLSAKLYRLVFTAHARKRMAERGISTREVVEALEAPVQLVYDRL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RDVHLALGHNDVAVVYAVRGLIVEIVTVMRRKRLRGTAGQARPATIPSTLLDRVRHG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA