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The map label for this gene is ybcL [C]

Identifier: 124028391

GI number: 124028391

Start: 1554438

End: 1555058

Strand: Direct

Name: ybcL [C]

Synonym: Hbut_1544

Alternate gene names: 124028391

Gene position: 1554438-1555058 (Clockwise)

Preceding gene: 124028390

Following gene: 124028395

Centisome position: 93.24

GC content: 51.69

Gene sequence:

>621_bases
ATGGCATCTAGACGGCATACCACTCTTCTAGCAGTACTTCTGGCAGGTATCATTGCAGCTACTGTTATCGCCATTTATGC
TCGTGGCAGGAGCGGTGCTGCCAGTGTTAGCCCGGTAAGCCTTGACAAGCTGCCGTGGCCACGGCTTGTCAAGGTTTCGA
CTCCTGCCATAGGTTCTAATGGCGTGTTTGAACACGCATATACTTGCGATGGTTCCGATACATCACCAATGCTGACCATA
GAGCTTACTGGTAACGCTGCGAAAGCCAAGTCACTGTTAATAGTAATGTTTGATCCTGATGCTCCCCGTGGAGTGTTTAT
CCACTGGCTCGTCTACAACATACCTGTAAACTCCACTGTAGTCGTTGTACCCGATAGTTTACCCAGACAAGCTGTAGTGG
ACGGCTTTTACCAAGGTGTTAACGACTTCGGCTGGATCGGCTACGGTGGGCCCTGTCCACCTCCGGGCGACCAGCCACAT
AGATACTACATACGTGTATTCGCCCTAGACTCTATGATCTCCTTGAGGCCGGGGCTACGGCTCGATGATGTGTGGAACGT
CGCTAAGAGCCACATTATAGCGTATGGCGAGGCTGTCGGAACGTATAGCAGGGCTGGCTAA

Upstream 100 bases:

>100_bases
ACAAGACGCTACAGTATATCTCGAAGGTTTAGGAGGAGATTTGGAAGACTGTAAAACTCCTTAACCCTTGTAGACACTCG
TTACTACATGGGTGGGTTTG

Downstream 100 bases:

>100_bases
GGCATCTTAGACTTGTGGAGCTACAGGGGAGGATTCGGGAGAAGTGTAGTGAGGAGGAGTGCCTTGGCCGCGTACCACAT
ACCTATCATGGTCCCGATTA

Product: phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MASRRHTTLLAVLLAGIIAATVIAIYARGRSGAASVSPVSLDKLPWPRLVKVSTPAIGSNGVFEHAYTCDGSDTSPMLTI
ELTGNAAKAKSLLIVMFDPDAPRGVFIHWLVYNIPVNSTVVVVPDSLPRQAVVDGFYQGVNDFGWIGYGGPCPPPGDQPH
RYYIRVFALDSMISLRPGLRLDDVWNVAKSHIIAYGEAVGTYSRAG

Sequences:

>Translated_206_residues
MASRRHTTLLAVLLAGIIAATVIAIYARGRSGAASVSPVSLDKLPWPRLVKVSTPAIGSNGVFEHAYTCDGSDTSPMLTI
ELTGNAAKAKSLLIVMFDPDAPRGVFIHWLVYNIPVNSTVVVVPDSLPRQAVVDGFYQGVNDFGWIGYGGPCPPPGDQPH
RYYIRVFALDSMISLRPGLRLDDVWNVAKSHIIAYGEAVGTYSRAG
>Mature_205_residues
ASRRHTTLLAVLLAGIIAATVIAIYARGRSGAASVSPVSLDKLPWPRLVKVSTPAIGSNGVFEHAYTCDGSDTSPMLTIE
LTGNAAKAKSLLIVMFDPDAPRGVFIHWLVYNIPVNSTVVVVPDSLPRQAVVDGFYQGVNDFGWIGYGGPCPPPGDQPHR
YYIRVFALDSMISLRPGLRLDDVWNVAKSHIIAYGEAVGTYSRAG

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=109, Percent_Identity=43.1192660550459, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1786990, Length=102, Percent_Identity=39.2156862745098, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 22108; Mature: 21976

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRRHTTLLAVLLAGIIAATVIAIYARGRSGAASVSPVSLDKLPWPRLVKVSTPAIGSN
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
GVFEHAYTCDGSDTSPMLTIELTGNAAKAKSLLIVMFDPDAPRGVFIHWLVYNIPVNSTV
CCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEE
VVVPDSLPRQAVVDGFYQGVNDFGWIGYGGPCPPPGDQPHRYYIRVFALDSMISLRPGLR
EEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCC
LDDVWNVAKSHIIAYGEAVGTYSRAG
HHHHHHHHHHHEEEECCHHCCCCCCC
>Mature Secondary Structure 
ASRRHTTLLAVLLAGIIAATVIAIYARGRSGAASVSPVSLDKLPWPRLVKVSTPAIGSN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
GVFEHAYTCDGSDTSPMLTIELTGNAAKAKSLLIVMFDPDAPRGVFIHWLVYNIPVNSTV
CCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEE
VVVPDSLPRQAVVDGFYQGVNDFGWIGYGGPCPPPGDQPHRYYIRVFALDSMISLRPGLR
EEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCC
LDDVWNVAKSHIIAYGEAVGTYSRAG
HHHHHHHHHHHEEEECCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]