| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124028287
Identifier: 124028287
GI number: 124028287
Start: 1444358
End: 1445170
Strand: Reverse
Name: 124028287
Synonym: Hbut_1438
Alternate gene names: NA
Gene position: 1445170-1444358 (Counterclockwise)
Preceding gene: 124028288
Following gene: 124028286
Centisome position: 86.68
GC content: 56.21
Gene sequence:
>813_bases TTGCCTGTAAGCTTCCTCCAGTTGGTCCGCGCCGAGTTCTACGCGTATACGAGATGGCTCAAGAATAGTCGTGCAATGCT CGCTACATTCCTGCTCTGGCCCTACCTAATGATGCTCGTCATGCTGGGTCTAGGCTATCTCTTTGGCGATCCACGCATAT ACGCGTTGAGGATGGGTGTGAAGAACCCAGTATTCTTCCTGTTATCGGCTAGCGTTATTGCGATGTCGACTGTCGCCATA ATAGACGATGTGGCGGGCTATACGCTGTACAACAGGTGGAACGGAACCCTAACATACATCGCGCTTGCCCCAGCCAGGCT TCCCAAGCAGCTCCTGGCTGCCGGCATACCGGCAGCAATACTCAGCCCGGCCGTAATGGCTGCAGCAGCGATGCCGGCAG CCATAGTCTTCGAGGGGCTCCGCGGCTTGGGCATAGTCGCCGCTATCTACTTCCTCATGCTGGCTGGCATGATACCCTTG GTTGGCTTCTCTGTTCTCGTTGCAAGCCTCCTCCTCATAGTCAAGGAGGAGAGCAACGTGATTAGCAGTATTTCGCCATT CCTCCTCCTCGTATCCGGTGTATTCTACCCCGTTGCAGTGCTGCCGGAACTCCTCCAAGAGGTGTCACGCGTAGTCCCGG TACGCTATGTTGTGGAGGCTGCACGTTCACTAGCAGCGCTGGGCACCTTTGAGGGAAGAGCGCTTATGGCGGCGCTCTAC ATGCTTGCCGTCCTAGGCGTCGTGTACAATGCCGCATCCGCCCCCATAGTTGCGAGGGTTGAAGCTTGGGTGAAGAAGAG TGGGTTCGACTAG
Upstream 100 bases:
>100_bases AGTGTTAGGAGTATAGAGGTTGGCAAGCCGACACTCGAGGACGTGTTCATAGCTCTAACGAGGCGCGGCGAGCAGGCCTA GGAGGGGGAGGCTGAGGGGC
Downstream 100 bases:
>100_bases TCTCCCCCATAAGCTCGTTGCCATAGTTTATCTTCATGCATTGCGTACCTGGAGGTACAAGTATGGCTTCATAAATGCAG CTCTAACCATGTTTCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPVSFLQLVRAEFYAYTRWLKNSRAMLATFLLWPYLMMLVMLGLGYLFGDPRIYALRMGVKNPVFFLLSASVIAMSTVAI IDDVAGYTLYNRWNGTLTYIALAPARLPKQLLAAGIPAAILSPAVMAAAAMPAAIVFEGLRGLGIVAAIYFLMLAGMIPL VGFSVLVASLLLIVKEESNVISSISPFLLLVSGVFYPVAVLPELLQEVSRVVPVRYVVEAARSLAALGTFEGRALMAALY MLAVLGVVYNAASAPIVARVEAWVKKSGFD
Sequences:
>Translated_270_residues MPVSFLQLVRAEFYAYTRWLKNSRAMLATFLLWPYLMMLVMLGLGYLFGDPRIYALRMGVKNPVFFLLSASVIAMSTVAI IDDVAGYTLYNRWNGTLTYIALAPARLPKQLLAAGIPAAILSPAVMAAAAMPAAIVFEGLRGLGIVAAIYFLMLAGMIPL VGFSVLVASLLLIVKEESNVISSISPFLLLVSGVFYPVAVLPELLQEVSRVVPVRYVVEAARSLAALGTFEGRALMAALY MLAVLGVVYNAASAPIVARVEAWVKKSGFD >Mature_269_residues PVSFLQLVRAEFYAYTRWLKNSRAMLATFLLWPYLMMLVMLGLGYLFGDPRIYALRMGVKNPVFFLLSASVIAMSTVAII DDVAGYTLYNRWNGTLTYIALAPARLPKQLLAAGIPAAILSPAVMAAAAMPAAIVFEGLRGLGIVAAIYFLMLAGMIPLV GFSVLVASLLLIVKEESNVISSISPFLLLVSGVFYPVAVLPELLQEVSRVVPVRYVVEAARSLAALGTFEGRALMAALYM LAVLGVVYNAASAPIVARVEAWVKKSGFD
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29146; Mature: 29014
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSFLQLVRAEFYAYTRWLKNSRAMLATFLLWPYLMMLVMLGLGYLFGDPRIYALRMGV CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC KNPVFFLLSASVIAMSTVAIIDDVAGYTLYNRWNGTLTYIALAPARLPKQLLAAGIPAAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCCCHHH LSPAVMAAAAMPAAIVFEGLRGLGIVAAIYFLMLAGMIPLVGFSVLVASLLLIVKEESNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ISSISPFLLLVSGVFYPVAVLPELLQEVSRVVPVRYVVEAARSLAALGTFEGRALMAALY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH MLAVLGVVYNAASAPIVARVEAWVKKSGFD HHHHHHHHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PVSFLQLVRAEFYAYTRWLKNSRAMLATFLLWPYLMMLVMLGLGYLFGDPRIYALRMGV CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC KNPVFFLLSASVIAMSTVAIIDDVAGYTLYNRWNGTLTYIALAPARLPKQLLAAGIPAAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCCCHHH LSPAVMAAAAMPAAIVFEGLRGLGIVAAIYFLMLAGMIPLVGFSVLVASLLLIVKEESNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ISSISPFLLLVSGVFYPVAVLPELLQEVSRVVPVRYVVEAARSLAALGTFEGRALMAALY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH MLAVLGVVYNAASAPIVARVEAWVKKSGFD HHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA