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The map label for this gene is spsC [H]

Identifier: 124028261

GI number: 124028261

Start: 1414198

End: 1415316

Strand: Direct

Name: spsC [H]

Synonym: Hbut_1412

Alternate gene names: 124028261

Gene position: 1414198-1415316 (Clockwise)

Preceding gene: 124028260

Following gene: 124028262

Centisome position: 84.83

GC content: 58.62

Gene sequence:

>1119_bases
TTGGGCTCTACCAGCTTTATCCCAGTCGCTAGGCCGCTTCTCGGCGAGGAGGAGTTTGAGGCTGTCCGTAGGGTTCTCGA
GTCCGGCATCCTCGCTCACGGGCCTGAGGTCGAGGCCTTCGAGAGGGAGTTCGCCGAGTTTGTCGGTGTGGATTACGCTG
TAGCAGTGGCTAATGGCACTGCTGCGCTGGACCTCATACTCAAGGCTTACCGTATCCGCGAGGGCGACGAAGTCATAACG
ACGCCTTTCAGCTTCATAGCTACCGCGAACGCCATTCTCTACCAGGGCGCCAGACCAGTCTTCGCCGATATAGACCCAGA
GACCTACAACCTAGATCCGGACAAGGTGCTCGAGCTGATAACGCCCAGAACACGGGCAATAATAGTTGTGCATCTCTACG
GCCACCCTGCGGACATGAAGGCTTTCAGGAAGATAGCCGAAGATCACAAGCTAATACTCATTGAGGATGCAGCGCAGGCC
CACGGAGCCGAGTATCGTGGAAGGATTGTTGGCTCGCTCGGCGACGCAGCGGCCTTCAGCTTCTATGCCACGAAGAACAT
GACGACGGGGGAGGGCGGCATGGTTACTACTAATGACCGGAGGGTGGCTGAGAGGATTAGGATGCTCCGGGACCACGGGC
AGGCCGAGAAGTACCTACACGTGGAGCTTGGCTACAATCTCCGGATGACGAATATAGCGGCTGCTATTGGGAGGGTTCAG
CTCCGCAGACTCCCCCAGCTCAATAGTCGTCGCCGCGAAAACGCTGAAGTTATGACGAGGATTCTCAGCCGCGTGAAGGG
TATCGTGCCGCCTATAGAGAAGCCTTGGGCTCGCCACGTGTACCACCAGTACGTGATACGGGTTACTAGCAGCTACCCCT
ACACCCGGGATGAGCTAGCCAAGCTGTTGAGGGAGAGGGGTATAGGTACGGCAGTCCACTACCCCAGGATCATACCGGAT
CAGCCGCTATACCAGAGCCTCGGCATAGGCTGCCCGAGGGGCTGCCCGGAGGCTAGGAGGGCTGCCAGGGAGGTTCTCAG
CCTCCCCGTGCACCCCCATGTGTCGCGGGAGCAGGCCGAAATGATTGCCCGCACTATAGCTGAGCTAGGGAGGAGCTAG

Upstream 100 bases:

>100_bases
AGCTAGGCGGCTGCCTTGCATGTTATTGACATGCTGGAGCCTAACAAGTGTTTATATACTGTGGTGTAGAGGATTGTAGC
TGTAGCTAGGGGCTTCCCGT

Downstream 100 bases:

>100_bases
GCCTTGGTGCTACGGGTTGCAGTTGTCGGAGCAGGATACATGGGTACAGCTCACGCCAGGGTTTTGGCCCGTATCGCCGA
TGAGCATCCCGGCCTAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MGSTSFIPVARPLLGEEEFEAVRRVLESGILAHGPEVEAFEREFAEFVGVDYAVAVANGTAALDLILKAYRIREGDEVIT
TPFSFIATANAILYQGARPVFADIDPETYNLDPDKVLELITPRTRAIIVVHLYGHPADMKAFRKIAEDHKLILIEDAAQA
HGAEYRGRIVGSLGDAAAFSFYATKNMTTGEGGMVTTNDRRVAERIRMLRDHGQAEKYLHVELGYNLRMTNIAAAIGRVQ
LRRLPQLNSRRRENAEVMTRILSRVKGIVPPIEKPWARHVYHQYVIRVTSSYPYTRDELAKLLRERGIGTAVHYPRIIPD
QPLYQSLGIGCPRGCPEARRAAREVLSLPVHPHVSREQAEMIARTIAELGRS

Sequences:

>Translated_372_residues
MGSTSFIPVARPLLGEEEFEAVRRVLESGILAHGPEVEAFEREFAEFVGVDYAVAVANGTAALDLILKAYRIREGDEVIT
TPFSFIATANAILYQGARPVFADIDPETYNLDPDKVLELITPRTRAIIVVHLYGHPADMKAFRKIAEDHKLILIEDAAQA
HGAEYRGRIVGSLGDAAAFSFYATKNMTTGEGGMVTTNDRRVAERIRMLRDHGQAEKYLHVELGYNLRMTNIAAAIGRVQ
LRRLPQLNSRRRENAEVMTRILSRVKGIVPPIEKPWARHVYHQYVIRVTSSYPYTRDELAKLLRERGIGTAVHYPRIIPD
QPLYQSLGIGCPRGCPEARRAAREVLSLPVHPHVSREQAEMIARTIAELGRS
>Mature_371_residues
GSTSFIPVARPLLGEEEFEAVRRVLESGILAHGPEVEAFEREFAEFVGVDYAVAVANGTAALDLILKAYRIREGDEVITT
PFSFIATANAILYQGARPVFADIDPETYNLDPDKVLELITPRTRAIIVVHLYGHPADMKAFRKIAEDHKLILIEDAAQAH
GAEYRGRIVGSLGDAAAFSFYATKNMTTGEGGMVTTNDRRVAERIRMLRDHGQAEKYLHVELGYNLRMTNIAAAIGRVQL
RRLPQLNSRRRENAEVMTRILSRVKGIVPPIEKPWARHVYHQYVIRVTSSYPYTRDELAKLLRERGIGTAVHYPRIIPDQ
PLYQSLGIGCPRGCPEARRAAREVLSLPVHPHVSREQAEMIARTIAELGRS

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=388, Percent_Identity=37.1134020618557, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI2367285, Length=343, Percent_Identity=29.7376093294461, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41626; Mature: 41495

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSTSFIPVARPLLGEEEFEAVRRVLESGILAHGPEVEAFEREFAEFVGVDYAVAVANGT
CCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCH
AALDLILKAYRIREGDEVITTPFSFIATANAILYQGARPVFADIDPETYNLDPDKVLELI
HHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHH
TPRTRAIIVVHLYGHPADMKAFRKIAEDHKLILIEDAAQAHGAEYRGRIVGSLGDAAAFS
CCCCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEECCHHHCCCHHCCCEEECCCCHHHEE
FYATKNMTTGEGGMVTTNDRRVAERIRMLRDHGQAEKYLHVELGYNLRMTNIAAAIGRVQ
EEEECCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHHHHHH
LRRLPQLNSRRRENAEVMTRILSRVKGIVPPIEKPWARHVYHQYVIRVTSSYPYTRDELA
HHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
KLLRERGIGTAVHYPRIIPDQPLYQSLGIGCPRGCPEARRAAREVLSLPVHPHVSREQAE
HHHHHCCCCCEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
MIARTIAELGRS
HHHHHHHHHCCC
>Mature Secondary Structure 
GSTSFIPVARPLLGEEEFEAVRRVLESGILAHGPEVEAFEREFAEFVGVDYAVAVANGT
CCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCH
AALDLILKAYRIREGDEVITTPFSFIATANAILYQGARPVFADIDPETYNLDPDKVLELI
HHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHH
TPRTRAIIVVHLYGHPADMKAFRKIAEDHKLILIEDAAQAHGAEYRGRIVGSLGDAAAFS
CCCCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEECCHHHCCCHHCCCEEECCCCHHHEE
FYATKNMTTGEGGMVTTNDRRVAERIRMLRDHGQAEKYLHVELGYNLRMTNIAAAIGRVQ
EEEECCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHHHHHH
LRRLPQLNSRRRENAEVMTRILSRVKGIVPPIEKPWARHVYHQYVIRVTSSYPYTRDELA
HHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
KLLRERGIGTAVHYPRIIPDQPLYQSLGIGCPRGCPEARRAAREVLSLPVHPHVSREQAE
HHHHHCCCCCEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
MIARTIAELGRS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]