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The map label for this gene is 124028246

Identifier: 124028246

GI number: 124028246

Start: 1395279

End: 1396550

Strand: Direct

Name: 124028246

Synonym: Hbut_1397

Alternate gene names: NA

Gene position: 1395279-1396550 (Clockwise)

Preceding gene: 124028244

Following gene: 124028247

Centisome position: 83.69

GC content: 57.86

Gene sequence:

>1272_bases
TTGGTGGTTTGGGTTTTGCGCGGCTGCCTGGTATATCTTGCTTCACCCATTCACCAGCAAGAGTATGTATCTTGGCTCCG
CTACACGTTCAAGACTTTCCTGCTGCATGCCGGTGTTAGTGTAAAGGATAGGGGTCTTGCTACGAGCCCCGAGGAGGCGG
CAAGGCTTGTCGAGGGCTGCAACTATGTCGTAGCGGTTGTTGCTACTGGTGGATCCGAGGAGCTCATACTATCGGTTGTA
AAGGCGGCTCGTGGCGCGCCAGTGCTAATTGTCGCTCAGCCCTATGCTAACAGTCTCCCCGCAGCACTTGAAGCCTACCC
TCTCCTCCGCGGTGGGAATACTGCGCTAGTATTCCTTGATAGTCTCGATCCCAGCTCTGTGGGTGCTGTTAGGAAGCTGC
GTAGCGCCGTTGCTGGGTTGCGTGGGGCTGCAAAGCTGCGCTCAGCCCGCATAGGCCTTATAGGGGAGCCCAGCCCATGG
CTCGTCTACAGTCGTACCACGCTTGAGAAGCTACGGGAGAGGCTTGGCGCCATACTCGTCCGGATAGAGATGGAGGAGCT
CTACGAACTTATGGACCGTGCTGAGCCCTCAGAGGAGCTTGTAGAACGTATCTATCACGGCGCAGCAGCAGTAGATGTCC
CACGTGGCCGTGTTCCGAATGCCCTCCGAGTCTACCTGGCCCTTCGCAGCATCGTTGAGAAGCACCGGCTCGATGCTGTC
ACCGTGGAGTGTTTCCGCCTCATAAAGGAACGAGGCACTACAGCTTGTCTGGCCCTCTCGCTACTCAATAGCGAGGGTGT
AGTGGCTGGCTGCGAGGCCGACGTGCCATCCACTGTTACGATGCTACTTCTCCACACCGTTTCAGCAGGCCCAGTCTTCA
TGGGTAACCCCTCAATAGTAAAGGGTGACAAGCTGATGATTGCCCACTGCACAGCACCCATCGCAATGGGGAGGCGCTAC
ACGCTTCACAGCCACTTCGAGAGCGGCCTCGGCGTAGGGATCTCTATACAGCTGGAGCCGGGCACAAGAGTGACGATAGC
CAGGTTCGACCCAGAGTTCAGGGTACTACGGGTCGGCCGTGGCGTGGTGGAGGAGTCGGGGCTGCTTAGCAGACTGCACT
GCCGCACCCAGCTCTGGATAAGGCTTGACGGCAACGCGGAGAGGATAGTAGAGGAGAGCATCGGCAACCACTACGTTGTG
GCCCTCGGGGACCACGTGGACGCTCTTAGGGCTGCAGCATCCATACTGGGGTCTAGTTTGGACATCCTCTAA

Upstream 100 bases:

>100_bases
TACCGCGTCTAGTAGATGCTCCAAGGTTACTTGGGGCTACATACCGGTAGGTGTGTTGTAGCGCTAGTGGCTTGAAATAA
GCTCTGTGGGACTTCTATGC

Downstream 100 bases:

>100_bases
GTAGACAGCCTCATCGATTTATTCCCCTGATCCATGCTGGTAAGACTGGTGACACAGCTCCTTGTCAAGGCCAAAGCGCG
TAGTCATAATGGGTGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: L-Fucose Isomerase 2 Domain Protein; L-Fucose Isomerase 2 Domain-Containing Protein; L-Fucose Isomerase _2 Domain Protein; L-Fucose Isomerase And Related Protein-Like Protein; L-Fucose Isomerase And Related Proteins; L-Fucose Isomerase And Related Proteins-Like

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MVVWVLRGCLVYLASPIHQQEYVSWLRYTFKTFLLHAGVSVKDRGLATSPEEAARLVEGCNYVVAVVATGGSEELILSVV
KAARGAPVLIVAQPYANSLPAALEAYPLLRGGNTALVFLDSLDPSSVGAVRKLRSAVAGLRGAAKLRSARIGLIGEPSPW
LVYSRTTLEKLRERLGAILVRIEMEELYELMDRAEPSEELVERIYHGAAAVDVPRGRVPNALRVYLALRSIVEKHRLDAV
TVECFRLIKERGTTACLALSLLNSEGVVAGCEADVPSTVTMLLLHTVSAGPVFMGNPSIVKGDKLMIAHCTAPIAMGRRY
TLHSHFESGLGVGISIQLEPGTRVTIARFDPEFRVLRVGRGVVEESGLLSRLHCRTQLWIRLDGNAERIVEESIGNHYVV
ALGDHVDALRAAASILGSSLDIL

Sequences:

>Translated_423_residues
MVVWVLRGCLVYLASPIHQQEYVSWLRYTFKTFLLHAGVSVKDRGLATSPEEAARLVEGCNYVVAVVATGGSEELILSVV
KAARGAPVLIVAQPYANSLPAALEAYPLLRGGNTALVFLDSLDPSSVGAVRKLRSAVAGLRGAAKLRSARIGLIGEPSPW
LVYSRTTLEKLRERLGAILVRIEMEELYELMDRAEPSEELVERIYHGAAAVDVPRGRVPNALRVYLALRSIVEKHRLDAV
TVECFRLIKERGTTACLALSLLNSEGVVAGCEADVPSTVTMLLLHTVSAGPVFMGNPSIVKGDKLMIAHCTAPIAMGRRY
TLHSHFESGLGVGISIQLEPGTRVTIARFDPEFRVLRVGRGVVEESGLLSRLHCRTQLWIRLDGNAERIVEESIGNHYVV
ALGDHVDALRAAASILGSSLDIL
>Mature_423_residues
MVVWVLRGCLVYLASPIHQQEYVSWLRYTFKTFLLHAGVSVKDRGLATSPEEAARLVEGCNYVVAVVATGGSEELILSVV
KAARGAPVLIVAQPYANSLPAALEAYPLLRGGNTALVFLDSLDPSSVGAVRKLRSAVAGLRGAAKLRSARIGLIGEPSPW
LVYSRTTLEKLRERLGAILVRIEMEELYELMDRAEPSEELVERIYHGAAAVDVPRGRVPNALRVYLALRSIVEKHRLDAV
TVECFRLIKERGTTACLALSLLNSEGVVAGCEADVPSTVTMLLLHTVSAGPVFMGNPSIVKGDKLMIAHCTAPIAMGRRY
TLHSHFESGLGVGISIQLEPGTRVTIARFDPEFRVLRVGRGVVEESGLLSRLHCRTQLWIRLDGNAERIVEESIGNHYVV
ALGDHVDALRAAASILGSSLDIL

Specific function: Unknown

COG id: COG2407

COG function: function code G; L-fucose isomerase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45866; Mature: 45866

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVWVLRGCLVYLASPIHQQEYVSWLRYTFKTFLLHAGVSVKDRGLATSPEEAARLVEGC
CEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
NYVVAVVATGGSEELILSVVKAARGAPVLIVAQPYANSLPAALEAYPLLRGGNTALVFLD
CEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCEEECCCEEEEEEE
SLDPSSVGAVRKLRSAVAGLRGAAKLRSARIGLIGEPSPWLVYSRTTLEKLRERLGAILV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEHHHHHHHHHHHHHEEE
RIEMEELYELMDRAEPSEELVERIYHGAAAVDVPRGRVPNALRVYLALRSIVEKHRLDAV
EEEHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH
TVECFRLIKERGTTACLALSLLNSEGVVAGCEADVPSTVTMLLLHTVSAGPVFMGNPSIV
HHHHHHHHHHCCCHHHHHEEHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCEE
KGDKLMIAHCTAPIAMGRRYTLHSHFESGLGVGISIQLEPGTRVTIARFDPEFRVLRVGR
ECCEEEEEECCCHHHCCCEEEEHHHHHCCCCEEEEEEECCCCEEEEEEECCCEEEEECCC
GVVEESGLLSRLHCRTQLWIRLDGNAERIVEESIGNHYVVALGDHVDALRAAASILGSSL
CHHHHCCHHHHHCCCEEEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC
DIL
CCC
>Mature Secondary Structure
MVVWVLRGCLVYLASPIHQQEYVSWLRYTFKTFLLHAGVSVKDRGLATSPEEAARLVEGC
CEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
NYVVAVVATGGSEELILSVVKAARGAPVLIVAQPYANSLPAALEAYPLLRGGNTALVFLD
CEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCEEECCCEEEEEEE
SLDPSSVGAVRKLRSAVAGLRGAAKLRSARIGLIGEPSPWLVYSRTTLEKLRERLGAILV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEHHHHHHHHHHHHHEEE
RIEMEELYELMDRAEPSEELVERIYHGAAAVDVPRGRVPNALRVYLALRSIVEKHRLDAV
EEEHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH
TVECFRLIKERGTTACLALSLLNSEGVVAGCEADVPSTVTMLLLHTVSAGPVFMGNPSIV
HHHHHHHHHHCCCHHHHHEEHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCEE
KGDKLMIAHCTAPIAMGRRYTLHSHFESGLGVGISIQLEPGTRVTIARFDPEFRVLRVGR
ECCEEEEEECCCHHHCCCEEEEHHHHHCCCCEEEEEEECCCCEEEEEEECCCEEEEECCC
GVVEESGLLSRLHCRTQLWIRLDGNAERIVEESIGNHYVVALGDHVDALRAAASILGSSL
CHHHHCCHHHHHCCCEEEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC
DIL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA