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The map label for this gene is 124028205

Identifier: 124028205

GI number: 124028205

Start: 1344591

End: 1344809

Strand: Reverse

Name: 124028205

Synonym: Hbut_1353

Alternate gene names: NA

Gene position: 1344809-1344591 (Counterclockwise)

Preceding gene: 124028206

Following gene: 124028204

Centisome position: 80.66

GC content: 62.56

Gene sequence:

>219_bases
GTGGCGCTCGAGCTAGAGGTGCCGAGGAGGCAGCCAAGCATAGTTGACGCCACAAAGCTCCCGATGTGTGCAAGCTGTGG
CCGCCCCATAACTCCCTGGGAGAAGGGCGTAGCTTTCGTCTGCCCCAACTGTGGCGAGGTAGTCATCTGGCGCTGCGCGC
GCTGCAGGAAAATGGGCGTAGTGTACCGCTGCCCGAAGTGCGGCTTCGAGGGTCCATGA

Upstream 100 bases:

>100_bases
GCGATAGCCGTCTATGCTGCGCTAGCTAGCTAGCCCCGGCAACACTGTTAAAAGCCTAGACCACGCTCCTCCACGCCCAG
CCTGGGGGTGTTGGGAGATC

Downstream 100 bases:

>100_bases
GCGTAGCCGTCTAGCCCTATTCTCGCCTCCTCGCCAGTGTAGGGAGTGCGTGTTTTGAGTGGCGAGTGCTGCCGCGACAT
AGTCTGTGAGGGCTGCCCCG

Product: Zn-ribbon RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MALELEVPRRQPSIVDATKLPMCASCGRPITPWEKGVAFVCPNCGEVVIWRCARCRKMGVVYRCPKCGFEGP

Sequences:

>Translated_72_residues
MALELEVPRRQPSIVDATKLPMCASCGRPITPWEKGVAFVCPNCGEVVIWRCARCRKMGVVYRCPKCGFEGP
>Mature_71_residues
ALELEVPRRQPSIVDATKLPMCASCGRPITPWEKGVAFVCPNCGEVVIWRCARCRKMGVVYRCPKCGFEGP

Specific function: Unknown

COG id: COG2888

COG function: function code J; Predicted Zn-ribbon RNA-binding protein with a function in translation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011668 [H]

Pfam domain/function: PF07754 DUF1610 [H]

EC number: NA

Molecular weight: Translated: 7999; Mature: 7867

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
15.3 %Cys+Met (Translated Protein)
11.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
14.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALELEVPRRQPSIVDATKLPMCASCGRPITPWEKGVAFVCPNCGEVVIWRCARCRKMGV
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCE
VYRCPKCGFEGP
EEECCCCCCCCC
>Mature Secondary Structure 
ALELEVPRRQPSIVDATKLPMCASCGRPITPWEKGVAFVCPNCGEVVIWRCARCRKMGV
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCE
VYRCPKCGFEGP
EEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]