Click here to switch to the map view.

The map label for this gene is 124028188

Identifier: 124028188

GI number: 124028188

Start: 1328157

End: 1328780

Strand: Direct

Name: 124028188

Synonym: Hbut_1334

Alternate gene names: NA

Gene position: 1328157-1328780 (Clockwise)

Preceding gene: 124028185

Following gene: 124028189

Centisome position: 79.67

GC content: 58.33

Gene sequence:

>624_bases
TTGGCTGGTTTTGAGCTGACAACATATCGCAGGGTGTGGATGGTAGTTTACGTGTTTCTGCCCTGGATCCTTTGGCCCCT
CGCGTTTGTTGTTTTTCGGGAGCACTTCTTGATTGCGATGGTGGCTGCTACCGGGGTGCTCGGTCTCGCTACTGCCACGA
TAGGTCCTGGGGTTAGGCTGGGAGGGATAGGGGTCAGGGAGGCTGTGTGCTCGGTGGCCTATGCGGTGTTGCTATACGCG
TTGTTTGTCGCTGGAGGCGTTCTCTCCAAGCTGCTTGGTCTCTGGGAGGGCGTAGCTGCAGTCTACGGAATGGTTGGGAG
GGGATTGCATCTCGTACCAGCTCTGGCATGGATAGGGTTCCTGGAGGAGGTCTACTGGCGCGGTGGCTTCCAGGAGGGGT
TGCTGTCTAGGGCCACGAGGAGGCCCTGGCTCGCATCTAGCCTGGTCTACTCGGCTGTTCACGTGTTTACAGGTAACCTT
GTCTTGGTTGCTGCCGCGCTGGTTGTAGGCCTGGTCCTTGGCTTTGAAGCTCACCGCTGTGGGGTTGCGGCATCGTCGCT
GACTCACGTGCTCTGGCTCTACGCTGTCATTCTCGTTGCGCCGGTTAACCTCCTGCTAGGCTAA

Upstream 100 bases:

>100_bases
TGGACACCTCCTCCTCGGCCGGGGCCTTGGCCCTGGCCAGCTTCATAACGCTTGTTTTCTCGTGGATGGTTACGGGAGGG
ATAGCCGGGAGGGAGCCAGC

Downstream 100 bases:

>100_bases
ACATTTTTCCTGGAAGTAGAAAACTCGTCTCGCTGGGTGGTTCATATTGCCCAGAGCCCTGGAGGTTTTTATCTCAACGA
GGCCGTGGAGCTTTCCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAGFELTTYRRVWMVVYVFLPWILWPLAFVVFREHFLIAMVAATGVLGLATATIGPGVRLGGIGVREAVCSVAYAVLLYA
LFVAGGVLSKLLGLWEGVAAVYGMVGRGLHLVPALAWIGFLEEVYWRGGFQEGLLSRATRRPWLASSLVYSAVHVFTGNL
VLVAAALVVGLVLGFEAHRCGVAASSLTHVLWLYAVILVAPVNLLLG

Sequences:

>Translated_207_residues
MAGFELTTYRRVWMVVYVFLPWILWPLAFVVFREHFLIAMVAATGVLGLATATIGPGVRLGGIGVREAVCSVAYAVLLYA
LFVAGGVLSKLLGLWEGVAAVYGMVGRGLHLVPALAWIGFLEEVYWRGGFQEGLLSRATRRPWLASSLVYSAVHVFTGNL
VLVAAALVVGLVLGFEAHRCGVAASSLTHVLWLYAVILVAPVNLLLG
>Mature_206_residues
AGFELTTYRRVWMVVYVFLPWILWPLAFVVFREHFLIAMVAATGVLGLATATIGPGVRLGGIGVREAVCSVAYAVLLYAL
FVAGGVLSKLLGLWEGVAAVYGMVGRGLHLVPALAWIGFLEEVYWRGGFQEGLLSRATRRPWLASSLVYSAVHVFTGNLV
LVAAALVVGLVLGFEAHRCGVAASSLTHVLWLYAVILVAPVNLLLG

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22225; Mature: 22094

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFELTTYRRVWMVVYVFLPWILWPLAFVVFREHFLIAMVAATGVLGLATATIGPGVRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
GGIGVREAVCSVAYAVLLYALFVAGGVLSKLLGLWEGVAAVYGMVGRGLHLVPALAWIGF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LEEVYWRGGFQEGLLSRATRRPWLASSLVYSAVHVFTGNLVLVAAALVVGLVLGFEAHRC
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAASSLTHVLWLYAVILVAPVNLLLG
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGFELTTYRRVWMVVYVFLPWILWPLAFVVFREHFLIAMVAATGVLGLATATIGPGVRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
GGIGVREAVCSVAYAVLLYALFVAGGVLSKLLGLWEGVAAVYGMVGRGLHLVPALAWIGF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LEEVYWRGGFQEGLLSRATRRPWLASSLVYSAVHVFTGNLVLVAAALVVGLVLGFEAHRC
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAASSLTHVLWLYAVILVAPVNLLLG
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA