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The map label for this gene is yejH [C]

Identifier: 124028136

GI number: 124028136

Start: 1285708

End: 1287330

Strand: Reverse

Name: yejH [C]

Synonym: Hbut_1281

Alternate gene names: 124028136

Gene position: 1287330-1285708 (Counterclockwise)

Preceding gene: 124028137

Following gene: 124028135

Centisome position: 77.22

GC content: 44.98

Gene sequence:

>1623_bases
ATGAAGGTAAGATTTCGGATCTGCAAGTGGCTCAGCCGCGAAGAGTTTCTCGAGATAGTTTCCTTTGCAGATTATGTTGG
TAGAAACGGAGGCTGTAGCATATTCGAGCTAAGTCTTACCGGAAGGCTTGATCTCGATAAATTACTCGACTTCCTCAATA
GCCTTGATTCCTTCGGAGCAGTATTCGAAGATAGGGATCGTAATATCCTAGAAGAATTTAAGAAAAACATTAACACCGTC
ATCATCGAGGCTATTGAGCCAGGCATAGTGGTGCTTAGATCACGGAGAATGCTTGCCGATTTTCTACATGAGTATAGGTC
TGATGGTAGTGTCTGGTACTCGCGGAAGCATAAGGGCTTTGTTGTAAAGCCATATAGGCTTGTCGATGTTGTCAATAGGC
TTCGCAGCGAGGGCTTCAGAATTGAAGATAAAACAGGGATTCTTGAACCGAGGGAGAGACTGAGAATAGAATTTGTTGGT
AAACTAAGAGAATATCAAGCTGAGGCTTTAGAAGCTTGGGTTGAGAATAGCTATCGTGGCGTTATAGCGTTACCTACAGG
TGCTGGTAAGACTATTGTTGCGTTAGCTGCAATTGCCAGGTTGAAGCTTCCAACACTTATCGTCGTTTATACCAAGGAGC
AGGTTCGTGAGTGGCTGGAAAAGATTAGGAAGTTTCTAGCTTTGCCACTAGGGATGGTTGGCGCATACTATTCTGACGAG
AAGAGACTTGCAGCAATAACCGTTACGACATACCAGTCCGCCTACCAGCATATAGGCCTACTCTATAACAGGTTTGGCCT
TCTGGTTGTTGATGAGGCTCACCACCTACCAGCCGACAAGTTTAAGCTTATAGCAGAAAAAATCCTTGCACCGTACCGTC
TCGCATTATCTGCTACACCCTACCGTGAGGATGGGAGACACGAGGAACTGTTTAGACTTGTAGGCGGGGTAATCTATGAA
AAGAGCTTGCAGGAGCTAGCAGAAAGGGGTTTTGTAGCATCATTCCAAGTTATACCGGTGCTGGTTAACCTCGAGCCTGA
CGAGAAGAAGAAGTATGAGAAGTTAAAGAACGAGTATAAGGTACTCTCGGCTGGCCGCAAGGTCGAAGAACTCGTTAAAG
CAGCATCTGCAGGCGATGAAAGGGCTAAAAAAGCCCTACAACTTCTTAGTCAAATGCGTCTACTTGTTGCACTATCTAGA
GCTAAGCTTGCTGAAGCAAAGAGGATTGTAGATAGCGAGCTTGCTAAGGGCTCAAAGATACTTGTCTTTACACAGTATAT
CGAGCAAGCTGAGCGTGTTGGCAAAATTCTAGGCGCACCGGTCATAACTAGTAAGACTGACAAAGCTAGGAGAGCACTAG
CTTTTGAACTCTTTAAGCGTGGCAGGTATAGGGTATTAGTTTTAACCACAGTTGGCGATGAGGGTATCGATGTCCCTGAT
GCAAATGTAGGGCTGATACTTTCCGGTACTTCTTCTAGGAGACAATTTATACAGAGGCTTGGTAGGCTACTAAGGCCCCA
GCCAGGTAAGGTATCGAAACTATATTATATTGCTGTGCGTGGTACTGCAGAACAAGCTATTTTAAAGAAGATTGCCGAGG
AAGTACTTGCATCCATGACTTAG

Upstream 100 bases:

>100_bases
ATGATCTCCCACATATAGTATATAGGGTATTACATGGGGGTATAACGACGTAGACAGTATACAATTATGCTGATTGTAGC
TTGATTCGCAGGGTGCGGAT

Downstream 100 bases:

>100_bases
GTGGATTTGTGTTTTCTACGCATTAAACCCTATAGCTGGGCTAGTATAGCCAGTGTTGCGGAGAGGAAGGGGAAGCCTTG
GCTAAGGGCGAGCTACAACT

Product: superfamily II DNA/RNA helicase

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DNA Repair Helicase; Helicase Domain Protein; Helicase Domain-Containing Protein; Helicase; ATP-Dependent DNA Helicase; DNA Repair Helicase RAD; Type III Restriction Res Subunit Family; Superfamily II DNA/RNA Helicase; DNA Repair Helicase Rad; DNA Repair Protein Rad; DNA/RNA Helicase; DNA Helicase; DNA Repair Protein RAD; ATP-Dependent Helicase; DNA Repair Protein; DNA/RNA Helicase Superfamily II; Helicase-Like Protein; Type III Restriction- System Subunit Res; DNA-Repair Protein; Helicase Protein; DNA Or RNA Helicase Of Superfamily II; DNA/RNA Repair Helicase; DEAD/DEAH Box Helicase; Helicase ATP-Dependent; Helicase DNA Repair; DNA Or RNA Helicase; Helicase DNA Repair Rad; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction Endonuclease Family Protein; XPB/RAD25-Related Helicase; Helicase ATP-Dependent Intein-Containing; DNA Or RNA Helicases Of Superfamily II; DEAD/DEAH Box Helicase Domain-Containing Protein; ATP-Dependet DEAD/DEAH Box Helicase; DEAD/DEAH Box Helicase-Like; DNA-Helicase; Nucleic Acid ATP-Dependent Helicase; DNA Or RNA Helicase Of Superfamily Protein II

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MKVRFRICKWLSREEFLEIVSFADYVGRNGGCSIFELSLTGRLDLDKLLDFLNSLDSFGAVFEDRDRNILEEFKKNINTV
IIEAIEPGIVVLRSRRMLADFLHEYRSDGSVWYSRKHKGFVVKPYRLVDVVNRLRSEGFRIEDKTGILEPRERLRIEFVG
KLREYQAEALEAWVENSYRGVIALPTGAGKTIVALAAIARLKLPTLIVVYTKEQVREWLEKIRKFLALPLGMVGAYYSDE
KRLAAITVTTYQSAYQHIGLLYNRFGLLVVDEAHHLPADKFKLIAEKILAPYRLALSATPYREDGRHEELFRLVGGVIYE
KSLQELAERGFVASFQVIPVLVNLEPDEKKKYEKLKNEYKVLSAGRKVEELVKAASAGDERAKKALQLLSQMRLLVALSR
AKLAEAKRIVDSELAKGSKILVFTQYIEQAERVGKILGAPVITSKTDKARRALAFELFKRGRYRVLVLTTVGDEGIDVPD
ANVGLILSGTSSRRQFIQRLGRLLRPQPGKVSKLYYIAVRGTAEQAILKKIAEEVLASMT

Sequences:

>Translated_540_residues
MKVRFRICKWLSREEFLEIVSFADYVGRNGGCSIFELSLTGRLDLDKLLDFLNSLDSFGAVFEDRDRNILEEFKKNINTV
IIEAIEPGIVVLRSRRMLADFLHEYRSDGSVWYSRKHKGFVVKPYRLVDVVNRLRSEGFRIEDKTGILEPRERLRIEFVG
KLREYQAEALEAWVENSYRGVIALPTGAGKTIVALAAIARLKLPTLIVVYTKEQVREWLEKIRKFLALPLGMVGAYYSDE
KRLAAITVTTYQSAYQHIGLLYNRFGLLVVDEAHHLPADKFKLIAEKILAPYRLALSATPYREDGRHEELFRLVGGVIYE
KSLQELAERGFVASFQVIPVLVNLEPDEKKKYEKLKNEYKVLSAGRKVEELVKAASAGDERAKKALQLLSQMRLLVALSR
AKLAEAKRIVDSELAKGSKILVFTQYIEQAERVGKILGAPVITSKTDKARRALAFELFKRGRYRVLVLTTVGDEGIDVPD
ANVGLILSGTSSRRQFIQRLGRLLRPQPGKVSKLYYIAVRGTAEQAILKKIAEEVLASMT
>Mature_540_residues
MKVRFRICKWLSREEFLEIVSFADYVGRNGGCSIFELSLTGRLDLDKLLDFLNSLDSFGAVFEDRDRNILEEFKKNINTV
IIEAIEPGIVVLRSRRMLADFLHEYRSDGSVWYSRKHKGFVVKPYRLVDVVNRLRSEGFRIEDKTGILEPRERLRIEFVG
KLREYQAEALEAWVENSYRGVIALPTGAGKTIVALAAIARLKLPTLIVVYTKEQVREWLEKIRKFLALPLGMVGAYYSDE
KRLAAITVTTYQSAYQHIGLLYNRFGLLVVDEAHHLPADKFKLIAEKILAPYRLALSATPYREDGRHEELFRLVGGVIYE
KSLQELAERGFVASFQVIPVLVNLEPDEKKKYEKLKNEYKVLSAGRKVEELVKAASAGDERAKKALQLLSQMRLLVALSR
AKLAEAKRIVDSELAKGSKILVFTQYIEQAERVGKILGAPVITSKTDKARRALAFELFKRGRYRVLVLTTVGDEGIDVPD
ANVGLILSGTSSRRQFIQRLGRLLRPQPGKVSKLYYIAVRGTAEQAILKKIAEEVLASMT

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4557563, Length=387, Percent_Identity=25.0645994832041, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17556358, Length=386, Percent_Identity=24.8704663212435, Blast_Score=99, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6322048, Length=364, Percent_Identity=25.8241758241758, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI221331068, Length=372, Percent_Identity=25.8064516129032, Blast_Score=123, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24662247, Length=372, Percent_Identity=25.8064516129032, Blast_Score=123, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61283; Mature: 61283

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRFRICKWLSREEFLEIVSFADYVGRNGGCSIFELSLTGRLDLDKLLDFLNSLDSFGA
CCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
VFEDRDRNILEEFKKNINTVIIEAIEPGIVVLRSRRMLADFLHEYRSDGSVWYSRKHKGF
HHHCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
VVKPYRLVDVVNRLRSEGFRIEDKTGILEPRERLRIEFVGKLREYQAEALEAWVENSYRG
EECHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VIALPTGAGKTIVALAAIARLKLPTLIVVYTKEQVREWLEKIRKFLALPLGMVGAYYSDE
EEEECCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
KRLAAITVTTYQSAYQHIGLLYNRFGLLVVDEAHHLPADKFKLIAEKILAPYRLALSATP
CEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCHHHHHEECCC
YREDGRHEELFRLVGGVIYEKSLQELAERGFVASFQVIPVLVNLEPDEKKKYEKLKNEYK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHH
VLSAGRKVEELVKAASAGDERAKKALQLLSQMRLLVALSRAKLAEAKRIVDSELAKGSKI
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVFTQYIEQAERVGKILGAPVITSKTDKARRALAFELFKRGRYRVLVLTTVGDEGIDVPD
EEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCC
ANVGLILSGTSSRRQFIQRLGRLLRPQPGKVSKLYYIAVRGTAEQAILKKIAEEVLASMT
CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVRFRICKWLSREEFLEIVSFADYVGRNGGCSIFELSLTGRLDLDKLLDFLNSLDSFGA
CCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
VFEDRDRNILEEFKKNINTVIIEAIEPGIVVLRSRRMLADFLHEYRSDGSVWYSRKHKGF
HHHCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
VVKPYRLVDVVNRLRSEGFRIEDKTGILEPRERLRIEFVGKLREYQAEALEAWVENSYRG
EECHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VIALPTGAGKTIVALAAIARLKLPTLIVVYTKEQVREWLEKIRKFLALPLGMVGAYYSDE
EEEECCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
KRLAAITVTTYQSAYQHIGLLYNRFGLLVVDEAHHLPADKFKLIAEKILAPYRLALSATP
CEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCHHHHHEECCC
YREDGRHEELFRLVGGVIYEKSLQELAERGFVASFQVIPVLVNLEPDEKKKYEKLKNEYK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHH
VLSAGRKVEELVKAASAGDERAKKALQLLSQMRLLVALSRAKLAEAKRIVDSELAKGSKI
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVFTQYIEQAERVGKILGAPVITSKTDKARRALAFELFKRGRYRVLVLTTVGDEGIDVPD
EEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCC
ANVGLILSGTSSRRQFIQRLGRLLRPQPGKVSKLYYIAVRGTAEQAILKKIAEEVLASMT
CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA