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The map label for this gene is 124028134

Identifier: 124028134

GI number: 124028134

Start: 1284091

End: 1284537

Strand: Direct

Name: 124028134

Synonym: Hbut_1279

Alternate gene names: NA

Gene position: 1284091-1284537 (Clockwise)

Preceding gene: 124028133

Following gene: 124028139

Centisome position: 77.02

GC content: 44.74

Gene sequence:

>447_bases
TTGGGTAGAGCACAGATACGTAGCAAGGGATTCAACGCTGAAAGAGAACTCGCTCGCAAGCTATGGAGTAGGGGGTTTGC
CGTAGTAAGAGCACCAGCAAGTGGCTCTAAGGCAAAGCATGTCTTCTATCCTGATCTAGTAGCTATGTATCGCGGAAAAA
TATTCGTCTTCGAGGTAAAGTATCGTACAACAAGCGAGACAATATACATAGAGAAGGAGAAGATATTGAAACTCGTTGAC
TTTGCTGAGCGTGCTGGAGGAAAAGCATACATAGCAATAAAGCTACTGGGCAAGGGTTGGCTAGTGGTCCCTGTTGATAA
CCTTGCAGAGACAGCGGGTGGAAGATACAAGATAGACCTAAATAGCATGAAGGTACTAACATTAGATGAATTCGTTAACA
GGATTCAGAACGAGAGTCTAACAAGATACGTGGCACGCCATGTGTAG

Upstream 100 bases:

>100_bases
TTGAATGTGCCACGCATAGCGGCGAAAACCCTCATGAAGAAGATGAAGAGGCTAAAGAAGCTAGAAGACAAGTACGGCAT
TACGATTAGGGTGAACATGG

Downstream 100 bases:

>100_bases
TAGATTCTAGCATGTTGATGTATCAGTTGGGTAAGTTTTCGTCACCCACTAGGAATTGTCGGCCCGGGAGTAACTCATCA
CGAGCAATATACTAACGTGG

Product: Holliday junction resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGRAQIRSKGFNAERELARKLWSRGFAVVRAPASGSKAKHVFYPDLVAMYRGKIFVFEVKYRTTSETIYIEKEKILKLVD
FAERAGGKAYIAIKLLGKGWLVVPVDNLAETAGGRYKIDLNSMKVLTLDEFVNRIQNESLTRYVARHV

Sequences:

>Translated_148_residues
MGRAQIRSKGFNAERELARKLWSRGFAVVRAPASGSKAKHVFYPDLVAMYRGKIFVFEVKYRTTSETIYIEKEKILKLVD
FAERAGGKAYIAIKLLGKGWLVVPVDNLAETAGGRYKIDLNSMKVLTLDEFVNRIQNESLTRYVARHV
>Mature_147_residues
GRAQIRSKGFNAERELARKLWSRGFAVVRAPASGSKAKHVFYPDLVAMYRGKIFVFEVKYRTTSETIYIEKEKILKLVDF
AERAGGKAYIAIKLLGKGWLVVPVDNLAETAGGRYKIDLNSMKVLTLDEFVNRIQNESLTRYVARHV

Specific function: Unknown

COG id: COG1591

COG function: function code L; Holliday junction resolvase - archaeal type

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR002732
- InterPro:   IPR014428
- InterPro:   IPR011335 [H]

Pfam domain/function: PF01870 Hjc [H]

EC number: NA

Molecular weight: Translated: 16828; Mature: 16697

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAQIRSKGFNAERELARKLWSRGFAVVRAPASGSKAKHVFYPDLVAMYRGKIFVFEVK
CCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCEEECHHHHHHHCCEEEEEEEE
YRTTSETIYIEKEKILKLVDFAERAGGKAYIAIKLLGKGWLVVPVDNLAETAGGRYKIDL
EECCCCEEEEEHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCHHHHHCCCEEEEEC
NSMKVLTLDEFVNRIQNESLTRYVARHV
CCEEEEEHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
GRAQIRSKGFNAERELARKLWSRGFAVVRAPASGSKAKHVFYPDLVAMYRGKIFVFEVK
CCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCEEECHHHHHHHCCEEEEEEEE
YRTTSETIYIEKEKILKLVDFAERAGGKAYIAIKLLGKGWLVVPVDNLAETAGGRYKIDL
EECCCCEEEEEHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCHHHHHCCCEEEEEC
NSMKVLTLDEFVNRIQNESLTRYVARHV
CCEEEEEHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]