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The map label for this gene is yceE [C]

Identifier: 124028023

GI number: 124028023

Start: 1172440

End: 1173615

Strand: Direct

Name: yceE [C]

Synonym: Hbut_1162

Alternate gene names: 124028023

Gene position: 1172440-1173615 (Clockwise)

Preceding gene: 124028022

Following gene: 124028024

Centisome position: 70.33

GC content: 57.91

Gene sequence:

>1176_bases
ATGGCTACAAGGGTTATAAGGATGAATGTGGCTGCGCTAAGCCTGTACTCGCTGTTCCGTGGATTTAGTGTTAGTGGCTA
CCAGGTATTGTTCTCCGCCTACATGAGGTCTCTAGGCTACAGCATGACGAGTATCGGTGGAGCAGTCACGGTATCCTCTC
TCGCTGGCGCACTGCTGGCGCCTGGTTTCGGCGCAGTAATAGAATGCTACGGCGCGAGGCTTACGACAACCCTTACGGGC
CTCATGCTGGTGGTTTCACTCCTACTACTCTCCATACCCGAGCCGGGCTACGCAGCCTTCGTAGCCTCCTACGTGCTATA
CATGCTCGCCTTCAGCCTAGGGCAGCCGGCTCGCTCAACACTCCTAGCGAAGAGTGTACCCGGGGAACTACACGGCTACT
ACACCGGCGTAACCATGGCTGTATTCGCCACTGCACGCATAGTCGGACCCCTCACCGCCGGCTGGCTAGCAGCTCGAGCC
GGCTACCCTCAAGCCTTCACTGTGCTCACCCTCTCAGCCGCAGTCGGGGTCACAGTGTTCCACATCCTCTCCATGGAGCC
TAGCGAGCCAGCCTGCAAGAACACGCTTCAGAAGCTCCGGAGCGCCTACACCAGCGCCCTCAAGCCGCACAAGGAGCTGC
GTAGGCTCTACCCCCTACTAGTCGTGGACCGGAGCGGCTGGAGCCTCTGGTTCCCCCTGCTAAGCGCCCAGCTTAAAGCA
GTAGGTTACACCGAGGACCAGATAGGCGCCCTCTACACGGCCTCAAGCCTCCTACAAGCCACAACAAGCATGGTATGGGG
AAGGCTTACAGACCGACTAGGCCCTGCCAAGACCGTAGCATCATCAGAACTCCTCGGCGCTGCAGCACTGCCGCTTCTCG
CAAACCCCCACCCATGGATAAACGCCGCAGCAGGAATGGCCCTCATCGGCCTATCAATAGCAGCATGGGTACCCGCATAC
AACAAGCTGGTAGCCCAGCTGGCAAGAGGAAACCTAGGCGAAGCATACGCAAACGCAAACGCGGTGAGAAGCCTCGCAGG
AACACCCACACCCACCATAGGCGGCATAATCTACGAAACACTGGGCCCCGCAGCACTATATACGCTATCAGCCACACTGC
TAACCACATCAGCGGCATACGCCCTCAAAACACTAGACACCAAGACAACAAAATAA

Upstream 100 bases:

>100_bases
TCGCTTCGCTGTTATCGGTCCTGTAGTGGGCCTGGTCGCCTGTAGAGTTAGGCTTAACCGTTACGATGCCTTCGCGTTTC
TTGATGGTGCGTAGCAAGGG

Downstream 100 bases:

>100_bases
TACCCACCTAAACACACCAACACCCAGCACGGCGGGCCCCGGCCACCCCAAAAACCTGGACTAGGATGGGCCCGTAGCTC
AGCCAGGACAGAGCGCCGGC

Product: permease

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: Permease; Facilitator Transporter

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MATRVIRMNVAALSLYSLFRGFSVSGYQVLFSAYMRSLGYSMTSIGGAVTVSSLAGALLAPGFGAVIECYGARLTTTLTG
LMLVVSLLLLSIPEPGYAAFVASYVLYMLAFSLGQPARSTLLAKSVPGELHGYYTGVTMAVFATARIVGPLTAGWLAARA
GYPQAFTVLTLSAAVGVTVFHILSMEPSEPACKNTLQKLRSAYTSALKPHKELRRLYPLLVVDRSGWSLWFPLLSAQLKA
VGYTEDQIGALYTASSLLQATTSMVWGRLTDRLGPAKTVASSELLGAAALPLLANPHPWINAAAGMALIGLSIAAWVPAY
NKLVAQLARGNLGEAYANANAVRSLAGTPTPTIGGIIYETLGPAALYTLSATLLTTSAAYALKTLDTKTTK

Sequences:

>Translated_391_residues
MATRVIRMNVAALSLYSLFRGFSVSGYQVLFSAYMRSLGYSMTSIGGAVTVSSLAGALLAPGFGAVIECYGARLTTTLTG
LMLVVSLLLLSIPEPGYAAFVASYVLYMLAFSLGQPARSTLLAKSVPGELHGYYTGVTMAVFATARIVGPLTAGWLAARA
GYPQAFTVLTLSAAVGVTVFHILSMEPSEPACKNTLQKLRSAYTSALKPHKELRRLYPLLVVDRSGWSLWFPLLSAQLKA
VGYTEDQIGALYTASSLLQATTSMVWGRLTDRLGPAKTVASSELLGAAALPLLANPHPWINAAAGMALIGLSIAAWVPAY
NKLVAQLARGNLGEAYANANAVRSLAGTPTPTIGGIIYETLGPAALYTLSATLLTTSAAYALKTLDTKTTK
>Mature_390_residues
ATRVIRMNVAALSLYSLFRGFSVSGYQVLFSAYMRSLGYSMTSIGGAVTVSSLAGALLAPGFGAVIECYGARLTTTLTGL
MLVVSLLLLSIPEPGYAAFVASYVLYMLAFSLGQPARSTLLAKSVPGELHGYYTGVTMAVFATARIVGPLTAGWLAARAG
YPQAFTVLTLSAAVGVTVFHILSMEPSEPACKNTLQKLRSAYTSALKPHKELRRLYPLLVVDRSGWSLWFPLLSAQLKAV
GYTEDQIGALYTASSLLQATTSMVWGRLTDRLGPAKTVASSELLGAAALPLLANPHPWINAAAGMALIGLSIAAWVPAYN
KLVAQLARGNLGEAYANANAVRSLAGTPTPTIGGIIYETLGPAALYTLSATLLTTSAAYALKTLDTKTTK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41088; Mature: 40957

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRVIRMNVAALSLYSLFRGFSVSGYQVLFSAYMRSLGYSMTSIGGAVTVSSLAGALLA
CCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHC
PGFGAVIECYGARLTTTLTGLMLVVSLLLLSIPEPGYAAFVASYVLYMLAFSLGQPARST
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
LLAKSVPGELHGYYTGVTMAVFATARIVGPLTAGWLAARAGYPQAFTVLTLSAAVGVTVF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HILSMEPSEPACKNTLQKLRSAYTSALKPHKELRRLYPLLVVDRSGWSLWFPLLSAQLKA
HHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHH
VGYTEDQIGALYTASSLLQATTSMVWGRLTDRLGPAKTVASSELLGAAALPLLANPHPWI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
NAAAGMALIGLSIAAWVPAYNKLVAQLARGNLGEAYANANAVRSLAGTPTPTIGGIIYET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
LGPAALYTLSATLLTTSAAYALKTLDTKTTK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATRVIRMNVAALSLYSLFRGFSVSGYQVLFSAYMRSLGYSMTSIGGAVTVSSLAGALLA
CCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHC
PGFGAVIECYGARLTTTLTGLMLVVSLLLLSIPEPGYAAFVASYVLYMLAFSLGQPARST
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
LLAKSVPGELHGYYTGVTMAVFATARIVGPLTAGWLAARAGYPQAFTVLTLSAAVGVTVF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HILSMEPSEPACKNTLQKLRSAYTSALKPHKELRRLYPLLVVDRSGWSLWFPLLSAQLKA
HHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHH
VGYTEDQIGALYTASSLLQATTSMVWGRLTDRLGPAKTVASSELLGAAALPLLANPHPWI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
NAAAGMALIGLSIAAWVPAYNKLVAQLARGNLGEAYANANAVRSLAGTPTPTIGGIIYET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
LGPAALYTLSATLLTTSAAYALKTLDTKTTK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA