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The map label for this gene is 124028006

Identifier: 124028006

GI number: 124028006

Start: 1155189

End: 1155824

Strand: Direct

Name: 124028006

Synonym: Hbut_1144

Alternate gene names: NA

Gene position: 1155189-1155824 (Clockwise)

Preceding gene: 124028002

Following gene: 124028007

Centisome position: 69.29

GC content: 52.52

Gene sequence:

>636_bases
GTGGATCCAGTCTGGGAGAGGGAGAAGCTTGAGGCCTGGAGGAGGCTATGGGAGGACCTCGAAATAGGCTACCTTGACAC
CGACATACTCGACGTGCTTGTAGAGTTCTTTCTCAGGCCCGGCTCGTACAGCAAGAGTAGCTGCTCGGGAAGAATAACCG
TTATCGACGCAAAATACCCGTGGGCTAAAGAGGAGACCATGACGGTGTTTAAGAAACATGAACCAGTAACTGTGGAAGAG
ATTAGGGCTGTTCTCGGGAGACCGTGGAGTACTAGGCTCTGGTTAAGCGTGCAAGGCCCCATATACCATGTCTACACCTA
CAGTCTTGAGGAGGCACGTATACTCCTCGAGGCTGCACGTGAGGCAGGCTTTAAGCATAGCGGGATACTTGTACCCTCTG
AGCATCCATTAGTAGAGCTTAGAACGGGAATTCGGGCTGATATACTGCTAGCAGACGGTGACACGGTCATCGTTGGGGAA
GATGAGAAACTACAACACGCTGTAAACGTTGCCAATGAGGTGCTCCTGCAAGCCAAGAAGAGGAATGAGAGGTTACTACA
AGCGTTAAGGTATAGAAGGCCAGCCAGGCTCTGGGAGCCCGCAGTAGAGGAGGCTAGGAGGAGAGGGTGGCTCTAG

Upstream 100 bases:

>100_bases
CAAGATACACTGGGGGCCACGCTACTGGAAGCTTATCAAGCTTAAGGATATCGGGTATATGGGTCCCAACCCAGCCTCCA
CCGGTGCCTGGGGACGCATC

Downstream 100 bases:

>100_bases
TACTACAAAACCTATAATCCAGCACTACATGGCCTTCCAACTCGGCCAGTGTAGCAGCGGGGCTGGATTATCCTTGAGTA
GTGAGGTTGAGATAGCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MDPVWEREKLEAWRRLWEDLEIGYLDTDILDVLVEFFLRPGSYSKSSCSGRITVIDAKYPWAKEETMTVFKKHEPVTVEE
IRAVLGRPWSTRLWLSVQGPIYHVYTYSLEEARILLEAAREAGFKHSGILVPSEHPLVELRTGIRADILLADGDTVIVGE
DEKLQHAVNVANEVLLQAKKRNERLLQALRYRRPARLWEPAVEEARRRGWL

Sequences:

>Translated_211_residues
MDPVWEREKLEAWRRLWEDLEIGYLDTDILDVLVEFFLRPGSYSKSSCSGRITVIDAKYPWAKEETMTVFKKHEPVTVEE
IRAVLGRPWSTRLWLSVQGPIYHVYTYSLEEARILLEAAREAGFKHSGILVPSEHPLVELRTGIRADILLADGDTVIVGE
DEKLQHAVNVANEVLLQAKKRNERLLQALRYRRPARLWEPAVEEARRRGWL
>Mature_211_residues
MDPVWEREKLEAWRRLWEDLEIGYLDTDILDVLVEFFLRPGSYSKSSCSGRITVIDAKYPWAKEETMTVFKKHEPVTVEE
IRAVLGRPWSTRLWLSVQGPIYHVYTYSLEEARILLEAAREAGFKHSGILVPSEHPLVELRTGIRADILLADGDTVIVGE
DEKLQHAVNVANEVLLQAKKRNERLLQALRYRRPARLWEPAVEEARRRGWL

Specific function: Unknown

COG id: COG1590

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0130 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003827
- InterPro:   IPR022908 [H]

Pfam domain/function: PF02676 TYW3 [H]

EC number: NA

Molecular weight: Translated: 24515; Mature: 24515

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVWEREKLEAWRRLWEDLEIGYLDTDILDVLVEFFLRPGSYSKSSCSGRITVIDAKYP
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
WAKEETMTVFKKHEPVTVEEIRAVLGRPWSTRLWLSVQGPIYHVYTYSLEEARILLEAAR
CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEEECHHHHHHHHHHHH
EAGFKHSGILVPSEHPLVELRTGIRADILLADGDTVIVGEDEKLQHAVNVANEVLLQAKK
HCCCCCCCEECCCCCCHHHCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH
RNERLLQALRYRRPARLWEPAVEEARRRGWL
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDPVWEREKLEAWRRLWEDLEIGYLDTDILDVLVEFFLRPGSYSKSSCSGRITVIDAKYP
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
WAKEETMTVFKKHEPVTVEEIRAVLGRPWSTRLWLSVQGPIYHVYTYSLEEARILLEAAR
CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEEECHHHHHHHHHHHH
EAGFKHSGILVPSEHPLVELRTGIRADILLADGDTVIVGEDEKLQHAVNVANEVLLQAKK
HCCCCCCCEECCCCCCHHHCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH
RNERLLQALRYRRPARLWEPAVEEARRRGWL
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726 [H]