| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is hflX [C]
Identifier: 124028000
GI number: 124028000
Start: 1149615
End: 1150742
Strand: Reverse
Name: hflX [C]
Synonym: Hbut_1138
Alternate gene names: 124028000
Gene position: 1150742-1149615 (Counterclockwise)
Preceding gene: 124028001
Following gene: 124027999
Centisome position: 69.02
GC content: 50.27
Gene sequence:
>1128_bases ATGGCTAAGGTTGCTGTTTGGAAACCATCAATACTAGTGCTGCCCCGTGGTCTCGCACGATGGGAGGTTAGGGAAGCCTA TGTGCTAGCTGAAACTGCAGGCTACCGCGTCGTAGATGTCCTCTACTACCGCCGTGTTTCCAGCTCCAAATTGCTAAGCG ATGCAAAGCTTGAGGAGTTGGCTGAGAAAGCCAAGAGTCTCGTGGGCAACGAGTATGCAAGGATAATAGTCTACGACAAC CTCAAACCAAGAGAGTATTTTAGGATAGTAAAGGCAACCGGTGTAAACACAATAGATAGGACAATGCTCATTCTCGAAAT ATTCTCGCTCCACGCTGGTAGCCGCGAAGCAAAGCTCCAAATAGAGCTTGCAAGGCTTAGGCATGAACTGCCTCTGGTCC GTGAAGCAATCAGACTCTCCAAGCTGAAAGAACTCCCTGGATTTCTAGGCCCTGGCGGCTACGCTATTGATGCATACTAC CGCTACATGGTTTCCCGCATAGCAAAAATCAAGCGTGAACTGCGAGAACTACGTCGTCGCCACGAGATTGAGAGGAGTAA GAGGAGGAGCGCAGGCCTACCACACATAGCCATAGTGGGCTACGCGAGTGCCGGTAAGACCTCGCTTTTCAACGCCATAA CCGGCTTACAGAAACCCGTCGGCCCCGAGTACTTTACAACAATAACACCTAAGAGGAGGGCAATAAGCTTCAATGGACTG CGAACAGTCTTCATAGATACTGTAGGCTTCATAATGCGTATCCCACCGGAGATAATAGAAGCGTTTCACTCAACACTAGA GGAAGCTGCTACAGCCGATGTGATACTATATGTTGTGGATGTTTCAGAGCCGGACACAGTTATTGCCGAGAAGCTTGACG AGGGGCTTCAGACGCTGAGGAGAATAGGTGTAATAGATAAACCCCTAATCATAGCAGCTAACAAGATAGATCTCGTTCCC CAAGAGGACATCGAGAGGCTCACAAGGCTACTAGAGGGTGCGGCATCAACCCTATACCCCGCCCTGGAAGCTGTGATACC GGTATCCGCAAAGACGGGTGCTGGGGTGGCTAAGCTGCTATGTCGTATAGCCACCCTGCTAGCAGGTACGAAAGGGTCTA CGTGTTGA
Upstream 100 bases:
>100_bases GGGACGAGTTCTACCTAACGTTAGGCGATATAGCCGAAATAAGGGAGGACTAGGCTCCAAGATGTTGTGGAGGTTAGCTT GCCAGGGTGGGTATTGAGGC
Downstream 100 bases:
>100_bases GGATAGGTCACAGACCCGAACGAGATAAGAGGATTACTACACATGTAGGGCTTGTAGCTAGAGCTTTTGGCGCTAATGGA TTCATTTTAGGTGATACATG
Product: GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAKVAVWKPSILVLPRGLARWEVREAYVLAETAGYRVVDVLYYRRVSSSKLLSDAKLEELAEKAKSLVGNEYARIIVYDN LKPREYFRIVKATGVNTIDRTMLILEIFSLHAGSREAKLQIELARLRHELPLVREAIRLSKLKELPGFLGPGGYAIDAYY RYMVSRIAKIKRELRELRRRHEIERSKRRSAGLPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGL RTVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLRRIGVIDKPLIIAANKIDLVP QEDIERLTRLLEGAASTLYPALEAVIPVSAKTGAGVAKLLCRIATLLAGTKGSTC
Sequences:
>Translated_375_residues MAKVAVWKPSILVLPRGLARWEVREAYVLAETAGYRVVDVLYYRRVSSSKLLSDAKLEELAEKAKSLVGNEYARIIVYDN LKPREYFRIVKATGVNTIDRTMLILEIFSLHAGSREAKLQIELARLRHELPLVREAIRLSKLKELPGFLGPGGYAIDAYY RYMVSRIAKIKRELRELRRRHEIERSKRRSAGLPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGL RTVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLRRIGVIDKPLIIAANKIDLVP QEDIERLTRLLEGAASTLYPALEAVIPVSAKTGAGVAKLLCRIATLLAGTKGSTC >Mature_374_residues AKVAVWKPSILVLPRGLARWEVREAYVLAETAGYRVVDVLYYRRVSSSKLLSDAKLEELAEKAKSLVGNEYARIIVYDNL KPREYFRIVKATGVNTIDRTMLILEIFSLHAGSREAKLQIELARLRHELPLVREAIRLSKLKELPGFLGPGGYAIDAYYR YMVSRIAKIKRELRELRRRHEIERSKRRSAGLPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGLR TVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLRRIGVIDKPLIIAANKIDLVPQ EDIERLTRLLEGAASTLYPALEAVIPVSAKTGAGVAKLLCRIATLLAGTKGSTC
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310124269, Length=218, Percent_Identity=32.1100917431193, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI310124267, Length=218, Percent_Identity=32.1100917431193, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI310124171, Length=218, Percent_Identity=32.1100917431193, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI310124169, Length=218, Percent_Identity=32.1100917431193, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI310133116, Length=218, Percent_Identity=30.7339449541284, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI310133118, Length=219, Percent_Identity=31.5068493150685, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1790615, Length=354, Percent_Identity=31.638418079096, Blast_Score=154, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17561038, Length=302, Percent_Identity=29.1390728476821, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24650079, Length=240, Percent_Identity=34.1666666666667, Blast_Score=92, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 41778; Mature: 41646
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVAVWKPSILVLPRGLARWEVREAYVLAETAGYRVVDVLYYRRVSSSKLLSDAKLEEL CCCEEEECCCEEEECCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHH AEKAKSLVGNEYARIIVYDNLKPREYFRIVKATGVNTIDRTMLILEIFSLHAGSREAKLQ HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHEE IELARLRHELPLVREAIRLSKLKELPGFLGPGGYAIDAYYRYMVSRIAKIKRELRELRRR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HEIERSKRRSAGLPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGL HHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHEEECCCH RTVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHH RIGVIDKPLIIAANKIDLVPQEDIERLTRLLEGAASTLYPALEAVIPVSAKTGAGVAKLL HCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH CRIATLLAGTKGSTC HHHHHHHCCCCCCCC >Mature Secondary Structure AKVAVWKPSILVLPRGLARWEVREAYVLAETAGYRVVDVLYYRRVSSSKLLSDAKLEEL CCEEEECCCEEEECCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHH AEKAKSLVGNEYARIIVYDNLKPREYFRIVKATGVNTIDRTMLILEIFSLHAGSREAKLQ HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHEE IELARLRHELPLVREAIRLSKLKELPGFLGPGGYAIDAYYRYMVSRIAKIKRELRELRRR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HEIERSKRRSAGLPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGL HHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHEEECCCH RTVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHH RIGVIDKPLIIAANKIDLVPQEDIERLTRLLEGAASTLYPALEAVIPVSAKTGAGVAKLL HCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH CRIATLLAGTKGSTC HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]