| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
Click here to switch to the map view.
The map label for this gene is 124027533
Identifier: 124027533
GI number: 124027533
Start: 630404
End: 631219
Strand: Direct
Name: 124027533
Synonym: Hbut_0651
Alternate gene names: NA
Gene position: 630404-631219 (Clockwise)
Preceding gene: 124027529
Following gene: 124027534
Centisome position: 37.81
GC content: 66.18
Gene sequence:
>816_bases ATGGTTCTCCCGCGGAGGGTCTGGGACTACATAAGGAGCCTGGGCAGCGAGGGCCCAGTCTACGCCGAGATAAGGGGGTG GAGATTCGATTACGTGGCTCCACGGTACCGGTACCGGCCCAGCGTGAGCGAGGTGGCGAGCTACTGTCCTAGCCACCGGG ACGCCTACCTCCAGCACGTCCGGGGCCTCCAGCCCCCTAGGAGCCTGCGGGCCCAGTACGGCGTCCTGGTTCACGAGTTC TTCCTGGAGCCCTTCCGCCTCGTAGACCGTGGCGCTGACAGCCTGGAGGCCCTCACGGCTGGGAAGTACAGGCTGGCCCG GAGGCTGGGGGTCAGGGCTGACCGGTTCCTAGAGAGGGTCTACGAGCTAGGCGCGATACTCGCGCTCCAGTCCCGGGTCG ACGGCGACATACCGTTGCGCGTCGAGCCCCCGATACCCGGCGCCCCGGTCGGCCTCAGCGACACTGTGCGCCCCGACCTC CTCGTAGGCTTCATCCCGGTGGAGGTTACGGCTGCCGGGCCCTGGGGTACATACGGCTCCAAGAAGGAGCTCCAATTGGC TGGCTACGCTCTCGCCATAGAGGCCTGGACCGGCATCCCGGTAGATTACGGGGTCGTGGTCTATGTTACGAGGAGGAGCG ATGAGCCCAGGCCGGAGTGGCGTGTCGTTGTCATCGACGATGCGTTGAGGAGGAGCTTTCTCCGGGAACGCGACGAGGTG GCAATGATAGTTGAGAACCGCGTCGACCCAGGCCCCGCGGGTGAAGGCTGCCCCTCCTGGTGCCCATTCCGTGGTGTAGA GGGCTGCCCCGGGTGA
Upstream 100 bases:
>100_bases TCCCAGCCCCTTGTGGTAATACCTTAAAAGCCTGGGGGCTTATCCCTTCCCCCGGGTAGCTCCCAGCAAAACACGTTTAG CCGCGGGAACCGTGGGAGCC
Downstream 100 bases:
>100_bases GCCCGGGGTGCCGGAGGTCCTCCTCGTGGCGACGCCGGGGACACGGATCTACGTGCGCCGGGGGGTGGTCTACGCGGAGG CGCCCAGCGGCGAGAAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Protein Csa1 Family; Csa1 Family CRISPR-Associated Protein; CRISPR-Associated Protein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MVLPRRVWDYIRSLGSEGPVYAEIRGWRFDYVAPRYRYRPSVSEVASYCPSHRDAYLQHVRGLQPPRSLRAQYGVLVHEF FLEPFRLVDRGADSLEALTAGKYRLARRLGVRADRFLERVYELGAILALQSRVDGDIPLRVEPPIPGAPVGLSDTVRPDL LVGFIPVEVTAAGPWGTYGSKKELQLAGYALAIEAWTGIPVDYGVVVYVTRRSDEPRPEWRVVVIDDALRRSFLRERDEV AMIVENRVDPGPAGEGCPSWCPFRGVEGCPG
Sequences:
>Translated_271_residues MVLPRRVWDYIRSLGSEGPVYAEIRGWRFDYVAPRYRYRPSVSEVASYCPSHRDAYLQHVRGLQPPRSLRAQYGVLVHEF FLEPFRLVDRGADSLEALTAGKYRLARRLGVRADRFLERVYELGAILALQSRVDGDIPLRVEPPIPGAPVGLSDTVRPDL LVGFIPVEVTAAGPWGTYGSKKELQLAGYALAIEAWTGIPVDYGVVVYVTRRSDEPRPEWRVVVIDDALRRSFLRERDEV AMIVENRVDPGPAGEGCPSWCPFRGVEGCPG >Mature_271_residues MVLPRRVWDYIRSLGSEGPVYAEIRGWRFDYVAPRYRYRPSVSEVASYCPSHRDAYLQHVRGLQPPRSLRAQYGVLVHEF FLEPFRLVDRGADSLEALTAGKYRLARRLGVRADRFLERVYELGAILALQSRVDGDIPLRVEPPIPGAPVGLSDTVRPDL LVGFIPVEVTAAGPWGTYGSKKELQLAGYALAIEAWTGIPVDYGVVVYVTRRSDEPRPEWRVVVIDDALRRSFLRERDEV AMIVENRVDPGPAGEGCPSWCPFRGVEGCPG
Specific function: Unknown
COG id: COG4343
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30452; Mature: 30452
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLPRRVWDYIRSLGSEGPVYAEIRGWRFDYVAPRYRYRPSVSEVASYCPSHRDAYLQHV CCCCHHHHHHHHHHCCCCCEEEEEECEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHH RGLQPPRSLRAQYGVLVHEFFLEPFRLVDRGADSLEALTAGKYRLARRLGVRADRFLERV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH YELGAILALQSRVDGDIPLRVEPPIPGAPVGLSDTVRPDLLVGFIPVEVTAAGPWGTYGS HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCC KKELQLAGYALAIEAWTGIPVDYGVVVYVTRRSDEPRPEWRVVVIDDALRRSFLRERDEV CCEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHE AMIVENRVDPGPAGEGCPSWCPFRGVEGCPG EEHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVLPRRVWDYIRSLGSEGPVYAEIRGWRFDYVAPRYRYRPSVSEVASYCPSHRDAYLQHV CCCCHHHHHHHHHHCCCCCEEEEEECEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHH RGLQPPRSLRAQYGVLVHEFFLEPFRLVDRGADSLEALTAGKYRLARRLGVRADRFLERV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH YELGAILALQSRVDGDIPLRVEPPIPGAPVGLSDTVRPDLLVGFIPVEVTAAGPWGTYGS HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCC KKELQLAGYALAIEAWTGIPVDYGVVVYVTRRSDEPRPEWRVVVIDDALRRSFLRERDEV CCEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHE AMIVENRVDPGPAGEGCPSWCPFRGVEGCPG EEHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA