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The map label for this gene is amzA [H]

Identifier: 124027501

GI number: 124027501

Start: 594378

End: 594947

Strand: Reverse

Name: amzA [H]

Synonym: Hbut_0618

Alternate gene names: 124027501

Gene position: 594947-594378 (Counterclockwise)

Preceding gene: 124027503

Following gene: 124027498

Centisome position: 35.69

GC content: 57.54

Gene sequence:

>570_bases
ATGGTAGTCATACACATTGCGGGTACACACGTTGAGCGGGATGATCTGGTGTTTCTCTCTGCTAGGCTCAGGGAGGCCTA
CAGTAACGCACACGTAAACATCGTGGAGCAGGAGCTGGAGCCGCCTCCGTCAGCCTATGACCCGGTGCGCCGCCAGTACC
TCAGCGACGCTATACTGGAGCTTGCAGCTATTCTCCACGAGAAGCTTAGGGGCGATGCCCTACTGGTTGTGGCAGGCTTT
GACGCCTATACGCCAGGCCTCAACTTTGTATTTGGCCAGGCACTCCTGGGCCGGGGTGTCGCCGTGGTCTACACTGCGAG
GCTGCACCCAGAGTTCTACGGTGAGCCGCCAAACGAAGCTCTCTATCGTAGGAGGCTTCTGAAGGAAGCGCTACACGAGC
TTGGCCACGCCCTTGGCCTGGAGCACTGTGCTACCCCGGGCTGCGTCATGAACTTCAGCAATAGCATATGGGGGGTTGAT
AAGAAGAAACCAATGTACTGTAGGCGGTGTACAGTAAAACTGGCCGCCAGGGGTGTAAGGGTCTCGCCAGCCTACATACT
CGGAGCCTGA

Upstream 100 bases:

>100_bases
GGATAAGGCTTCTAGGCATGGTAGAACTCATACGCTTGACTCTCTTCACACTACTACTAGCTGCCGCTCTAGCTCTAGCA
TAGTATGGAGGCACAACATC

Downstream 100 bases:

>100_bases
ATAAAAACACAGCCTCAGGGTATGTCACCGACGCTCTCTTCGCTATAGCGAACCAAGCCCTGCAAGCCTTAGCGTTCAGC
AATAGCCGCGAAGGAATGCT

Product: Zn-dependent protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MVVIHIAGTHVERDDLVFLSARLREAYSNAHVNIVEQELEPPPSAYDPVRRQYLSDAILELAAILHEKLRGDALLVVAGF
DAYTPGLNFVFGQALLGRGVAVVYTARLHPEFYGEPPNEALYRRRLLKEALHELGHALGLEHCATPGCVMNFSNSIWGVD
KKKPMYCRRCTVKLAARGVRVSPAYILGA

Sequences:

>Translated_189_residues
MVVIHIAGTHVERDDLVFLSARLREAYSNAHVNIVEQELEPPPSAYDPVRRQYLSDAILELAAILHEKLRGDALLVVAGF
DAYTPGLNFVFGQALLGRGVAVVYTARLHPEFYGEPPNEALYRRRLLKEALHELGHALGLEHCATPGCVMNFSNSIWGVD
KKKPMYCRRCTVKLAARGVRVSPAYILGA
>Mature_189_residues
MVVIHIAGTHVERDDLVFLSARLREAYSNAHVNIVEQELEPPPSAYDPVRRQYLSDAILELAAILHEKLRGDALLVVAGF
DAYTPGLNFVFGQALLGRGVAVVYTARLHPEFYGEPPNEALYRRRLLKEALHELGHALGLEHCATPGCVMNFSNSIWGVD
KKKPMYCRRCTVKLAARGVRVSPAYILGA

Specific function: Probable zinc metalloprotease [H]

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012962
- InterPro:   IPR012091 [H]

Pfam domain/function: PF07998 Peptidase_M54 [H]

EC number: NA

Molecular weight: Translated: 20963; Mature: 20963

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVIHIAGTHVERDDLVFLSARLREAYSNAHVNIVEQELEPPPSAYDPVRRQYLSDAILE
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHH
LAAILHEKLRGDALLVVAGFDAYTPGLNFVFGQALLGRGVAVVYTARLHPEFYGEPPNEA
HHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEEECHHHCCCCCHHH
LYRRRLLKEALHELGHALGLEHCATPGCVMNFSNSIWGVDKKKPMYCRRCTVKLAARGVR
HHHHHHHHHHHHHHHHHHCHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VSPAYILGA
CCCEEEECC
>Mature Secondary Structure
MVVIHIAGTHVERDDLVFLSARLREAYSNAHVNIVEQELEPPPSAYDPVRRQYLSDAILE
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHH
LAAILHEKLRGDALLVVAGFDAYTPGLNFVFGQALLGRGVAVVYTARLHPEFYGEPPNEA
HHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEEECHHHCCCCCHHH
LYRRRLLKEALHELGHALGLEHCATPGCVMNFSNSIWGVDKKKPMYCRRCTVKLAARGVR
HHHHHHHHHHHHHHHHHHCHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VSPAYILGA
CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA