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The map label for this gene is yigB [C]

Identifier: 124027480

GI number: 124027480

Start: 567093

End: 567803

Strand: Reverse

Name: yigB [C]

Synonym: Hbut_0596

Alternate gene names: 124027480

Gene position: 567803-567093 (Counterclockwise)

Preceding gene: 124027484

Following gene: 124027478

Centisome position: 34.06

GC content: 55.84

Gene sequence:

>711_bases
TTGGCGGGTATTAGGCTTGTATCGTTTGATGTGTGGAATACGCTACTACGCTTTGAGGCAATTGCTGGATTTATTGTTGA
GGGCTTGTCGGAGGCTACTGGGAAGCCTCTTAGCGCTGTGAGGACAGCCTTTGAGAGGGCTCGTGCAGAGGCTAAAAGGG
CAAGGCTTAGGGGTGAGGGTGGCAATCCGCTGCTAGAGTCTCAAGAAATGCTTGCTGTGGCACTTGATGCTCCGCTGGAT
CGTGTCCGGCGGGGCATCGCTATCGGACTGCTACGGGCTATAGAGCATGTGGAGGAGATAGTTTACCCGGAAGCCCTCCA
GGCTCTCGAAACAGCTGCAAGGATTGCTGGGAAGGTTGCTGTTCTGGGCAACGTGTTGTTCTGGCCCGGCAGCTATACAA
GGCTATTGCTGGAGAAGGCCAGGCTTGAACACTTCATAGACTTCCAGCTCTATGCAGACGAGATTGGGCTCTACAAGCCC
GATCGTAGAGCGTTTCTCCAGCTGTGCAAGGAGGCGGATGTAGATCCTGGAGAGGCTGTCCATGTCGGCGACGAGCTAAC
GGAGGATGTTGCTGGTGCTCTCTCGGCAGGCATGATGGCTGTCTGGGTTAACCGGAGCCTCAGGGAGCCAGTCTACATGC
CCGAGGCCAGGCTAGCAGCTATACCGAGCCTGACACTCCTTGGGGAGGCGCTGCAGAGGCTTACACACTAA

Upstream 100 bases:

>100_bases
ACGGTGCATAGGCTTACAGAGCTTATCTTGGTAATCAGCTATGGGAGATAGCCTCGTATTCTCCCAGCCCCTGGCTAGAT
TATGGGGGCTGGATAGGGCC

Downstream 100 bases:

>100_bases
CCTCTAGGGTTTTGTAAGTTTTCAACCAGCTCGCTAAGCCTTGAATCCCTCCTCAACGCCTCCAGTACAGTGTCACGGTC
AGCCGCAAGCGTTATGATTC

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: Hydrolase; Hydrolase HAD Superfamily; HAD Superfamily Hydrolase; Hydrolase Related 2-Haloalkanoic Acid Dehalogenase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAGIRLVSFDVWNTLLRFEAIAGFIVEGLSEATGKPLSAVRTAFERARAEAKRARLRGEGGNPLLESQEMLAVALDAPLD
RVRRGIAIGLLRAIEHVEEIVYPEALQALETAARIAGKVAVLGNVLFWPGSYTRLLLEKARLEHFIDFQLYADEIGLYKP
DRRAFLQLCKEADVDPGEAVHVGDELTEDVAGALSAGMMAVWVNRSLREPVYMPEARLAAIPSLTLLGEALQRLTH

Sequences:

>Translated_236_residues
MAGIRLVSFDVWNTLLRFEAIAGFIVEGLSEATGKPLSAVRTAFERARAEAKRARLRGEGGNPLLESQEMLAVALDAPLD
RVRRGIAIGLLRAIEHVEEIVYPEALQALETAARIAGKVAVLGNVLFWPGSYTRLLLEKARLEHFIDFQLYADEIGLYKP
DRRAFLQLCKEADVDPGEAVHVGDELTEDVAGALSAGMMAVWVNRSLREPVYMPEARLAAIPSLTLLGEALQRLTH
>Mature_235_residues
AGIRLVSFDVWNTLLRFEAIAGFIVEGLSEATGKPLSAVRTAFERARAEAKRARLRGEGGNPLLESQEMLAVALDAPLDR
VRRGIAIGLLRAIEHVEEIVYPEALQALETAARIAGKVAVLGNVLFWPGSYTRLLLEKARLEHFIDFQLYADEIGLYKPD
RRAFLQLCKEADVDPGEAVHVGDELTEDVAGALSAGMMAVWVNRSLREPVYMPEARLAAIPSLTLLGEALQRLTH

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25941; Mature: 25810

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGIRLVSFDVWNTLLRFEAIAGFIVEGLSEATGKPLSAVRTAFERARAEAKRARLRGEG
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GNPLLESQEMLAVALDAPLDRVRRGIAIGLLRAIEHVEEIVYPEALQALETAARIAGKVA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGNVLFWPGSYTRLLLEKARLEHFIDFQLYADEIGLYKPDRRAFLQLCKEADVDPGEAV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEE
HVGDELTEDVAGALSAGMMAVWVNRSLREPVYMPEARLAAIPSLTLLGEALQRLTH
ECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGIRLVSFDVWNTLLRFEAIAGFIVEGLSEATGKPLSAVRTAFERARAEAKRARLRGEG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GNPLLESQEMLAVALDAPLDRVRRGIAIGLLRAIEHVEEIVYPEALQALETAARIAGKVA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGNVLFWPGSYTRLLLEKARLEHFIDFQLYADEIGLYKPDRRAFLQLCKEADVDPGEAV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEE
HVGDELTEDVAGALSAGMMAVWVNRSLREPVYMPEARLAAIPSLTLLGEALQRLTH
ECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA