| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027470
Identifier: 124027470
GI number: 124027470
Start: 554261
End: 555211
Strand: Direct
Name: 124027470
Synonym: Hbut_0585
Alternate gene names: NA
Gene position: 554261-555211 (Clockwise)
Preceding gene: 124027466
Following gene: 124027472
Centisome position: 33.25
GC content: 57.52
Gene sequence:
>951_bases TTGACTGGGGCTGTGCGTCTAGAGGGGCCAGTTTATAGTCTCGAGCTGCGTTATGATCCGGACAGCTATAGTCCAAGGGA CACCATGAGGACCTATAGTTTTGGCTGGATGTACTGGGGTGAGGATAGGGGCTACATAGAGCTGTGTAGGGGCAGCGTAG CCGAGGTATCCTGGTCAGACGCTGTTCTCTCCGTGAGAGTGTTCTCAGAGCCCGGCACGCGTTGCTGGGAGATGGCTATC AACAATATTGCGGGTATGCTGGGCGTTAACGAGGACCTGGCTGAGTACTGGAGGCTAGCGCGTGGCGACCCCCTCGTTGG CGGGCTGGCGGAGTCTATGAGAGGGCTCCGGCTGCGACAGACAAGCATCTGGTATGGCTTTCTCGTAGCAGTCTGCCAGC AGAATGTCAGCTTCCGGCAAGGCTGGAACATGCTGTACAGGCTACACCTCAACGCATCCAGGCGCCTCGTCCTCCCTAAC GGTCGTGTCTACCTTGAAACTCCAAGCCCTCAGAACCTAAGCTTCGAAGTGCTACGCTCATCCGGCCTAGGCTACCGAGC TAGGACGGTGTTGAACCTGGTAAGTGCGCGAGCATGGGAGCTAGAGTGCGGCAACCTAGAGGAGGCCCGTAGCGTATTGG GCGTTGGCAACTATACAGTGTCGCTGGTAGAGCTGCTTGCATGCCGCAACTATAGCAGTCTTCTGCTAGACCGGTGGCTT CGCAGGCTTGCAGCCGAGGCGTACAAGGTTTCGGAGCGGGAGGCTGCGAAAGCGCTAACTGAGAGGTTCGGAGAGTGGAG GGGGTTGGCGGCAATACATACAACAATAGCCTTTGATGCTGAGCCTTCGCGGCGGGCGCTTGAGAGGCTTAGAAGGGGTG AAAACAAGCCGGGACGGGTAGAGCCGTCACCCATATCGCTCTGGAAGCATACGCCTCCTGTTAGCTCTTAG
Upstream 100 bases:
>100_bases TGCAGGTGGTAGCCTCTTAGCCGAAACATCAGCAAGGTAAACCGATATATTTCCTCACCAGCACACCATATGTGACAGCA AGCTGTAGGTATGGAGTGCC
Downstream 100 bases:
>100_bases GCAGGAACCTAGCTAGAAGCCTGGCGAACGGCGGCAGTATCCTCGTTTGCACGTAGACCGTTGCGGGCCCAGTAACCTCT ATGACGAAGCCCTCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTGAVRLEGPVYSLELRYDPDSYSPRDTMRTYSFGWMYWGEDRGYIELCRGSVAEVSWSDAVLSVRVFSEPGTRCWEMAI NNIAGMLGVNEDLAEYWRLARGDPLVGGLAESMRGLRLRQTSIWYGFLVAVCQQNVSFRQGWNMLYRLHLNASRRLVLPN GRVYLETPSPQNLSFEVLRSSGLGYRARTVLNLVSARAWELECGNLEEARSVLGVGNYTVSLVELLACRNYSSLLLDRWL RRLAAEAYKVSEREAAKALTERFGEWRGLAAIHTTIAFDAEPSRRALERLRRGENKPGRVEPSPISLWKHTPPVSS
Sequences:
>Translated_316_residues MTGAVRLEGPVYSLELRYDPDSYSPRDTMRTYSFGWMYWGEDRGYIELCRGSVAEVSWSDAVLSVRVFSEPGTRCWEMAI NNIAGMLGVNEDLAEYWRLARGDPLVGGLAESMRGLRLRQTSIWYGFLVAVCQQNVSFRQGWNMLYRLHLNASRRLVLPN GRVYLETPSPQNLSFEVLRSSGLGYRARTVLNLVSARAWELECGNLEEARSVLGVGNYTVSLVELLACRNYSSLLLDRWL RRLAAEAYKVSEREAAKALTERFGEWRGLAAIHTTIAFDAEPSRRALERLRRGENKPGRVEPSPISLWKHTPPVSS >Mature_315_residues TGAVRLEGPVYSLELRYDPDSYSPRDTMRTYSFGWMYWGEDRGYIELCRGSVAEVSWSDAVLSVRVFSEPGTRCWEMAIN NIAGMLGVNEDLAEYWRLARGDPLVGGLAESMRGLRLRQTSIWYGFLVAVCQQNVSFRQGWNMLYRLHLNASRRLVLPNG RVYLETPSPQNLSFEVLRSSGLGYRARTVLNLVSARAWELECGNLEEARSVLGVGNYTVSLVELLACRNYSSLLLDRWLR RLAAEAYKVSEREAAKALTERFGEWRGLAAIHTTIAFDAEPSRRALERLRRGENKPGRVEPSPISLWKHTPPVSS
Specific function: Unknown
COG id: COG0122
COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35862; Mature: 35731
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAVRLEGPVYSLELRYDPDSYSPRDTMRTYSFGWMYWGEDRGYIELCRGSVAEVSWSD CCCCEEECCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCHHHHCCCHHCCCCCC AVLSVRVFSEPGTRCWEMAINNIAGMLGVNEDLAEYWRLARGDPLVGGLAESMRGLRLRQ EEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH TSIWYGFLVAVCQQNVSFRQGWNMLYRLHLNASRRLVLPNGRVYLETPSPQNLSFEVLRS HHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCEEEECCCEEEEECCCCCCCCHHHHHC SGLGYRARTVLNLVSARAWELECGNLEEARSVLGVGNYTVSLVELLACRNYSSLLLDRWL CCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH RRLAAEAYKVSEREAAKALTERFGEWRGLAAIHTTIAFDAEPSRRALERLRRGENKPGRV HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEECCCCHHHHHHHHHCCCCCCCCC EPSPISLWKHTPPVSS CCCCHHHCCCCCCCCC >Mature Secondary Structure TGAVRLEGPVYSLELRYDPDSYSPRDTMRTYSFGWMYWGEDRGYIELCRGSVAEVSWSD CCCEEECCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCHHHHCCCHHCCCCCC AVLSVRVFSEPGTRCWEMAINNIAGMLGVNEDLAEYWRLARGDPLVGGLAESMRGLRLRQ EEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH TSIWYGFLVAVCQQNVSFRQGWNMLYRLHLNASRRLVLPNGRVYLETPSPQNLSFEVLRS HHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCEEEECCCEEEEECCCCCCCCHHHHHC SGLGYRARTVLNLVSARAWELECGNLEEARSVLGVGNYTVSLVELLACRNYSSLLLDRWL CCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH RRLAAEAYKVSEREAAKALTERFGEWRGLAAIHTTIAFDAEPSRRALERLRRGENKPGRV HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEECCCCHHHHHHHHHCCCCCCCCC EPSPISLWKHTPPVSS CCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA