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The map label for this gene is 124027357

Identifier: 124027357

GI number: 124027357

Start: 448971

End: 449429

Strand: Direct

Name: 124027357

Synonym: Hbut_0468

Alternate gene names: NA

Gene position: 448971-449429 (Clockwise)

Preceding gene: 124027354

Following gene: 124027358

Centisome position: 26.93

GC content: 50.54

Gene sequence:

>459_bases
GTGGCGTCGATAATGTCTCCGACACCAACGCGCAGGTTTCTAGCTGAGCTACAAAACCTGGTAGGTAAACGCGTCGAAGT
AGTATTGGTTAACGGGCAGAGGTATCGTGGAACCCTGCTGGGCTTCGATCATCCAGAACTGAACCTCGTACTCGGAGACG
TTGAAGCCGAAAGGGAGAAAGTACCACGGCTATTCCTAATGGGCCGTGTAATAGCCGAGATAAGAGCCTATGAGCTAATG
CTCTTTGATGCCAGAGAGTTTGCAGACTATATAGTCAGAAAGCTTGGACTACGTCCTGACGCTGTAAGAGTCTACGAGGA
TGCCGGCGTAGTAGTAGTCTATAATAGTATAAGAGTCACAGCAAACGGCGTAGAAGGGGCTGGCACTCTCGCCGCAAAGA
TTAGCTACCTTCTGAAGGAGTATCTTGAGGCTAAGAGGAGGGGCGAGAAGCCCGCTTGA

Upstream 100 bases:

>100_bases
TTCCCCCCAGCTGTAATGCACCAGGTTTCTGTAGATCTGCCCTAAACACTACCTATTATATAGCACTCCAGCCACCCCTA
CCACCTCCGGTGTAGTTGTA

Downstream 100 bases:

>100_bases
AGCGCGAGATAGGAGTTTTTGAAATCCGCGAAAAAGACCTAGCGGGAAGAATAGCTAGACTCTATACTCCACACGGCGTA
CTCGAAACTCCTGCACTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Small Nuclear Ribonucleoprotein Homolog; Sm Ribonucleoprotein Core-Like Protein; Small Nuclear Ribonucleoprotein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MASIMSPTPTRRFLAELQNLVGKRVEVVLVNGQRYRGTLLGFDHPELNLVLGDVEAEREKVPRLFLMGRVIAEIRAYELM
LFDAREFADYIVRKLGLRPDAVRVYEDAGVVVVYNSIRVTANGVEGAGTLAAKISYLLKEYLEAKRRGEKPA

Sequences:

>Translated_152_residues
MASIMSPTPTRRFLAELQNLVGKRVEVVLVNGQRYRGTLLGFDHPELNLVLGDVEAEREKVPRLFLMGRVIAEIRAYELM
LFDAREFADYIVRKLGLRPDAVRVYEDAGVVVVYNSIRVTANGVEGAGTLAAKISYLLKEYLEAKRRGEKPA
>Mature_151_residues
ASIMSPTPTRRFLAELQNLVGKRVEVVLVNGQRYRGTLLGFDHPELNLVLGDVEAEREKVPRLFLMGRVIAEIRAYELML
FDAREFADYIVRKLGLRPDAVRVYEDAGVVVVYNSIRVTANGVEGAGTLAAKISYLLKEYLEAKRRGEKPA

Specific function: Unknown

COG id: COG1958

COG function: function code K; Small nuclear ribonucleoprotein (snRNP) homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17080; Mature: 16949

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIMSPTPTRRFLAELQNLVGKRVEVVLVNGQRYRGTLLGFDHPELNLVLGDVEAEREK
CCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCCEEEEEECCHHHHHH
VPRLFLMGRVIAEIRAYELMLFDAREFADYIVRKLGLRPDAVRVYEDAGVVVVYNSIRVT
HHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECEEEE
ANGVEGAGTLAAKISYLLKEYLEAKRRGEKPA
ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ASIMSPTPTRRFLAELQNLVGKRVEVVLVNGQRYRGTLLGFDHPELNLVLGDVEAEREK
CCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCCEEEEEECCHHHHHH
VPRLFLMGRVIAEIRAYELMLFDAREFADYIVRKLGLRPDAVRVYEDAGVVVVYNSIRVT
HHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECEEEE
ANGVEGAGTLAAKISYLLKEYLEAKRRGEKPA
ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA