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The map label for this gene is 124027309

Identifier: 124027309

GI number: 124027309

Start: 406786

End: 407559

Strand: Reverse

Name: 124027309

Synonym: Hbut_0418

Alternate gene names: NA

Gene position: 407559-406786 (Counterclockwise)

Preceding gene: 124027312

Following gene: 124027308

Centisome position: 24.45

GC content: 52.58

Gene sequence:

>774_bases
ATGCCCATAGAGCGTGTGAAGACTGGTATACCGGGCCTAGACGAGATACTAAATGGTGGTATACCTAGGAGGAACGTGGT
ATTGCTCAGCGGCGGGCCCGGCACCGGCAAGACCATTATGAGCCAGCAGTACCTATGGAACGGCCTGCAGATGGGTGAGC
CAGGTGTCTACGTGGCACTAGAGGAGCATCCAGTACAGGTTAGAATCAACATGGCCCAGTTCGGTTGGGATGTAAGACCA
TATGAGCGCGAGGGTACCTTCGCTATAGTGGATGCGTTTACCGGCGGCATAGGTGAGACTGCAAAGAGAGAGCGCTACGT
AGTCCGCGATCCAACGGATGTGGGTCTCCTCATCGACGTTCTAAAGGAGGCTATAAGGGATACTGGCGCCCAGCGCGTAG
TAATAGATTCCGTCTCCACGCTCTATCTAACAAAACCCAGCGTAGCTAGGAGCGTAGTAATGATGCTCAAGCGTGTTCTA
AGCGGCCTCGGCACCACAAGCTTCCTCGTAAGCCAGGTATCCGTCACCGAGAGAGGATTCGGTGGTCCGGGCGTAGAGCA
CGCAGCAGATGGTATCATAAGGCTAGACCTCGACGAGATCGACGGTGAGTTGAAGAGGAGCCTAATAATCTGGAAGATGA
GGGGCACAAAGCACAGTATGAGAAGGCATCCATTCGAGATAACAGATAAGGGCATAATAATCTATGCAAACAAAGTCCTA
CGCGTAACAAGACGTGGCGTCTATGAGGAGACAGTTAGCAGTGAAGAGAGCTAG

Upstream 100 bases:

>100_bases
ATGCTTAAACGGGGATTCTTTATTGAATCTTGCCCCTTCACACCCACTAAATTTAGGGCTGGGTGTATGAGTTAGTGTGA
GTGGAGGAGGTGACAAGTAT

Downstream 100 bases:

>100_bases
AAATCCCTTCTTCATTTTTAGATGTACAACCCATATACGGGTCACACTCATAGTCATGTCCTAGCCTCTATACCCCATGA
AGGCATATACACCTCTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MPIERVKTGIPGLDEILNGGIPRRNVVLLSGGPGTGKTIMSQQYLWNGLQMGEPGVYVALEEHPVQVRINMAQFGWDVRP
YEREGTFAIVDAFTGGIGETAKRERYVVRDPTDVGLLIDVLKEAIRDTGAQRVVIDSVSTLYLTKPSVARSVVMMLKRVL
SGLGTTSFLVSQVSVTERGFGGPGVEHAADGIIRLDLDEIDGELKRSLIIWKMRGTKHSMRRHPFEITDKGIIIYANKVL
RVTRRGVYEETVSSEES

Sequences:

>Translated_257_residues
MPIERVKTGIPGLDEILNGGIPRRNVVLLSGGPGTGKTIMSQQYLWNGLQMGEPGVYVALEEHPVQVRINMAQFGWDVRP
YEREGTFAIVDAFTGGIGETAKRERYVVRDPTDVGLLIDVLKEAIRDTGAQRVVIDSVSTLYLTKPSVARSVVMMLKRVL
SGLGTTSFLVSQVSVTERGFGGPGVEHAADGIIRLDLDEIDGELKRSLIIWKMRGTKHSMRRHPFEITDKGIIIYANKVL
RVTRRGVYEETVSSEES
>Mature_256_residues
PIERVKTGIPGLDEILNGGIPRRNVVLLSGGPGTGKTIMSQQYLWNGLQMGEPGVYVALEEHPVQVRINMAQFGWDVRPY
EREGTFAIVDAFTGGIGETAKRERYVVRDPTDVGLLIDVLKEAIRDTGAQRVVIDSVSTLYLTKPSVARSVVMMLKRVLS
GLGTTSFLVSQVSVTERGFGGPGVEHAADGIIRLDLDEIDGELKRSLIIWKMRGTKHSMRRHPFEITDKGIIIYANKVLR
VTRRGVYEETVSSEES

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 28408; Mature: 28277

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIERVKTGIPGLDEILNGGIPRRNVVLLSGGPGTGKTIMSQQYLWNGLQMGEPGVYVAL
CCHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEE
EEHPVQVRINMAQFGWDVRPYEREGTFAIVDAFTGGIGETAKRERYVVRDPTDVGLLIDV
ECCCEEEEEEHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHCEEEEECCCCHHHHHHH
LKEAIRDTGAQRVVIDSVSTLYLTKPSVARSVVMMLKRVLSGLGTTSFLVSQVSVTERGF
HHHHHHCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
GGPGVEHAADGIIRLDLDEIDGELKRSLIIWKMRGTKHSMRRHPFEITDKGIIIYANKVL
CCCCHHHHHCCEEEEEHHHHCHHHHHEEEEEEECCCHHHHHCCCCEECCCCEEEEEHHHH
RVTRRGVYEETVSSEES
HHHHHCHHHHHHCCCCC
>Mature Secondary Structure 
PIERVKTGIPGLDEILNGGIPRRNVVLLSGGPGTGKTIMSQQYLWNGLQMGEPGVYVAL
CHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEE
EEHPVQVRINMAQFGWDVRPYEREGTFAIVDAFTGGIGETAKRERYVVRDPTDVGLLIDV
ECCCEEEEEEHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHCEEEEECCCCHHHHHHH
LKEAIRDTGAQRVVIDSVSTLYLTKPSVARSVVMMLKRVLSGLGTTSFLVSQVSVTERGF
HHHHHHCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
GGPGVEHAADGIIRLDLDEIDGELKRSLIIWKMRGTKHSMRRHPFEITDKGIIIYANKVL
CCCCHHHHHCCEEEEEHHHHCHHHHHEEEEEEECCCHHHHHCCCCEECCCCEEEEEHHHH
RVTRRGVYEETVSSEES
HHHHHCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]