| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027261
Identifier: 124027261
GI number: 124027261
Start: 354962
End: 355867
Strand: Direct
Name: 124027261
Synonym: Hbut_0364
Alternate gene names: NA
Gene position: 354962-355867 (Clockwise)
Preceding gene: 124027259
Following gene: 124027262
Centisome position: 21.29
GC content: 52.87
Gene sequence:
>906_bases ATGTCTAGACTTGTAGCCGCTATAGCGGCCACACTGGTACTCGTAGCTGCAAGCTTTACAGCATACACGATACTCAGCCG TGGCGGTAATTGGACTAGCAGTAAGAACCAGGGACTCATAGTTGTCGTGTCTTTTCCAAATCTCATAGACGATATTCGCC AGATAGTCTGTAGCGACGATACAGTCTATAGCCTGGCACCGCCGGGCGTGGATCCCCACAGTTACCAGCTAACACTGCGC GACTACGAGCTGCTCCGTAGGGCAAGCATAGTAGTCTCTACGGGGCATGCACCCTTCGAGACTGCACTAGCCGAGAAGGC ATCTTCCGACAAGCTGATAGTTATACCGGACATTCTTCGCGAGCATGGGGGCCGTATACTAGTCAATCCTGATACTGGAA AGCTAAACCTCCACATACCAATATACAATCCGTACAACTACAGAATATTCATAGGGTACCTTGGTGAGAGGCTTGCAGAG CTTAGGCCTAGCTGCGCAGAAGTTTACCGGTCCAATGTGGCCAAGGTGTTGGAGAGGCTTAACAATATTACCACTGTAGC CCCACAGCTTAACGTTACCGCTGTGGGCTCTACGCCTTCCATCCAGTACGCCGTAGAGTGGCTTGGCATCCACGTGGTGA AACTACTAGTGAGGGAGCACGGTGTGGGCACGTCAACTGAAGACCTGGCCGAGGTTAAGAGGCTATTTGAGGCTGGTAAG GCTAAGCTGGCAGTGGTAATGGTTCTAGAGAACGGTAAGCCTGCAACCCCCGCCGATGAGAAGCTAGCCGAGCTTGCAGA AGAGTATGGCATACCTATCCTGCGTGTCCCCGCCCCCTACATGGCTGGTAGCGTGCTTGACAAGCTCGAGGCAGTCGTGG CTGAGGCTCGCAACCTAAAGGGCTAA
Upstream 100 bases:
>100_bases TACACTCCATCCTAGGGCTACCCCAGCTGTGCACAGTTAACTAGAAACCCTTATATAAGGTGTGCACAGTTGCGGATAGC CTCCGGGGCAGGTAGATGCC
Downstream 100 bases:
>100_bases GGAGGAGTGGAGGCGTGGCTGCAATGAACATCCCTGTTGTGTCTCAAGTTTTGGCTGTGCTTGCTGCCGCGGGGATGCTA TGGCTCTTCGCATTGAGCGT
Product: ABC-type metal ion transport system, periplasmic component
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSRLVAAIAATLVLVAASFTAYTILSRGGNWTSSKNQGLIVVVSFPNLIDDIRQIVCSDDTVYSLAPPGVDPHSYQLTLR DYELLRRASIVVSTGHAPFETALAEKASSDKLIVIPDILREHGGRILVNPDTGKLNLHIPIYNPYNYRIFIGYLGERLAE LRPSCAEVYRSNVAKVLERLNNITTVAPQLNVTAVGSTPSIQYAVEWLGIHVVKLLVREHGVGTSTEDLAEVKRLFEAGK AKLAVVMVLENGKPATPADEKLAELAEEYGIPILRVPAPYMAGSVLDKLEAVVAEARNLKG
Sequences:
>Translated_301_residues MSRLVAAIAATLVLVAASFTAYTILSRGGNWTSSKNQGLIVVVSFPNLIDDIRQIVCSDDTVYSLAPPGVDPHSYQLTLR DYELLRRASIVVSTGHAPFETALAEKASSDKLIVIPDILREHGGRILVNPDTGKLNLHIPIYNPYNYRIFIGYLGERLAE LRPSCAEVYRSNVAKVLERLNNITTVAPQLNVTAVGSTPSIQYAVEWLGIHVVKLLVREHGVGTSTEDLAEVKRLFEAGK AKLAVVMVLENGKPATPADEKLAELAEEYGIPILRVPAPYMAGSVLDKLEAVVAEARNLKG >Mature_300_residues SRLVAAIAATLVLVAASFTAYTILSRGGNWTSSKNQGLIVVVSFPNLIDDIRQIVCSDDTVYSLAPPGVDPHSYQLTLRD YELLRRASIVVSTGHAPFETALAEKASSDKLIVIPDILREHGGRILVNPDTGKLNLHIPIYNPYNYRIFIGYLGERLAEL RPSCAEVYRSNVAKVLERLNNITTVAPQLNVTAVGSTPSIQYAVEWLGIHVVKLLVREHGVGTSTEDLAEVKRLFEAGKA KLAVVMVLENGKPATPADEKLAELAEEYGIPILRVPAPYMAGSVLDKLEAVVAEARNLKG
Specific function: Unknown
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32707; Mature: 32576
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLVAAIAATLVLVAASFTAYTILSRGGNWTSSKNQGLIVVVSFPNLIDDIRQIVCSDD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCC TVYSLAPPGVDPHSYQLTLRDYELLRRASIVVSTGHAPFETALAEKASSDKLIVIPDILR CEEEECCCCCCCCCEEEEEHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEEHHHHH EHGGRILVNPDTGKLNLHIPIYNPYNYRIFIGYLGERLAELRPSCAEVYRSNVAKVLERL HCCCEEEECCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH NNITTVAPQLNVTAVGSTPSIQYAVEWLGIHVVKLLVREHGVGTSTEDLAEVKRLFEAGK HCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC AKLAVVMVLENGKPATPADEKLAELAEEYGIPILRVPAPYMAGSVLDKLEAVVAEARNLK CEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC G C >Mature Secondary Structure SRLVAAIAATLVLVAASFTAYTILSRGGNWTSSKNQGLIVVVSFPNLIDDIRQIVCSDD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCC TVYSLAPPGVDPHSYQLTLRDYELLRRASIVVSTGHAPFETALAEKASSDKLIVIPDILR CEEEECCCCCCCCCEEEEEHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEEHHHHH EHGGRILVNPDTGKLNLHIPIYNPYNYRIFIGYLGERLAELRPSCAEVYRSNVAKVLERL HCCCEEEECCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH NNITTVAPQLNVTAVGSTPSIQYAVEWLGIHVVKLLVREHGVGTSTEDLAEVKRLFEAGK HCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC AKLAVVMVLENGKPATPADEKLAELAEEYGIPILRVPAPYMAGSVLDKLEAVVAEARNLK CEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA