| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027224
Identifier: 124027224
GI number: 124027224
Start: 318884
End: 320041
Strand: Direct
Name: 124027224
Synonym: Hbut_0327
Alternate gene names: NA
Gene position: 318884-320041 (Clockwise)
Preceding gene: 124027216
Following gene: 124027226
Centisome position: 19.13
GC content: 60.36
Gene sequence:
>1158_bases TTGGGGCGCTGTCTGCTCTGCGGGCGCGAGGGGCTTGTAGCCTCCTCTATCGGCGTCTGCGCCGAGTGTCTGCGCCAGCA TCCTGGGGAGGCCCTGGAGCTTGTTTGGAGCCGGAGGGCCCGGTGGAGGAGAGAGCTTGGGTTACCGCCCGAACCACCCA GGGACCCTAGTGGTGTTCCGTGCAGGCTATGCGTTAACGAGTGCAGGATACCACCTGGTGGCCGTGGCTACTGCGGCATC TGGGCCAACCGCGGCGGAAGGCTCGAGCCGATAACCGGCCGTGGCAGGTTGGCTGTCTACACTTACCTCGACCCCCACCC AACAAACTGTGTCGCTGAACCCGTCTGCCCAGCCAGCACGTCGAGGGGCTATCCACGGTACACGTTTACCCGGGGCGTTG AGAAGGGCTACTATAACCTAGCCGTGTTTATGGCTGGGTGCCCGCTCGACTGCATTTTCTGCCAGAACTGGGAGCACAAA ACGATGATAGCCCACGGCAGGATAGCAGCTAGGTACGTGATGAGTGTGGAGAAGCTTGTAGAGGAGGCTCTCAACCCGAG GGTGACATGTGTCTGCTACTTCGGAGGGGACCCAACACCATACATGCCCATGCTGATAGAAGCCTCAAGGAGGATCCTTG AAGAGGCCAGAAAGAAGGGTCAATGGCCTAAAAGGATTTGCTGGGAGACCGACGGCCTGGCAAACCCCGCTGTCCTTCGG CAAGCCGCGAGGCTGAGCCTGGAGAGTGGCGGCATAGTGAAGATTGACTGGAAGGCCTGGACACCAAGCATATACGAGGC GCTAACCGGCGTGGACGGCGCCAAGGCTGTTGAGAGGTTGAAGGAGAATACTAGGATGCTAGCCGAGATGGCTGCTGAGA GGCCGGAACCACCGCTCCTCGTGGTCAGCATACTACTCGTACCGGGCTACGTTGATGCTAGGGAGGTCCGGGGTATAGCG GGCTACGTGGCAGGCCTCATGGAGGAGTATGGCGTGAACATACCCGTTGTCCTGCTAGCATTCCACCCCGACTACCTTGC CAGGGACCTGCCGCCAACCAGCCGCAGACACGCCGCCGAGGCGAGAAAAGCCGTGCTCGAGGCAGGCGTGAAAGAGGTCT ACATCGGGAACATCTGGCTGCTGGGAGACTACTATTAG
Upstream 100 bases:
>100_bases TAGGGTTTGCTTCTAGGAGCATGAGGGAGGGCCATGAGGGTACTTCACAAGTCTTGCCTGGCTTCCAGGCTACTGGTTCG TGGCGAGGGCTGACCCGGTC
Downstream 100 bases:
>100_bases TCGCTGCCGCCCAGGCTATTATCCAGCATGGACGCTATCTCCCGCGCTATCTCGCCCGCCCTCAACGTAGCATCACGAAC GGCATCGATCACAGCCGACT
Product: pyruvate-formate lyase-activating enzyme, PflA
Products: NA
Alternate protein names: Radical SAM Domain Protein; Pyruvate-Formate Lyase-Activating; Radical Sam Domain Protein; Glycyl Radical-Activating; Pyruvate Formate-Lyase Activating; PflA Pyruvate-Formate Lyase-Activating; Pyruvate Formate-Lyase Activating Related Protein; Pyruvate-Formate Lyase-Activating PflA; Pyruvate Formate-Lyase Activating -Like Protein; Radical SAM Family Protein
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MGRCLLCGREGLVASSIGVCAECLRQHPGEALELVWSRRARWRRELGLPPEPPRDPSGVPCRLCVNECRIPPGGRGYCGI WANRGGRLEPITGRGRLAVYTYLDPHPTNCVAEPVCPASTSRGYPRYTFTRGVEKGYYNLAVFMAGCPLDCIFCQNWEHK TMIAHGRIAARYVMSVEKLVEEALNPRVTCVCYFGGDPTPYMPMLIEASRRILEEARKKGQWPKRICWETDGLANPAVLR QAARLSLESGGIVKIDWKAWTPSIYEALTGVDGAKAVERLKENTRMLAEMAAERPEPPLLVVSILLVPGYVDAREVRGIA GYVAGLMEEYGVNIPVVLLAFHPDYLARDLPPTSRRHAAEARKAVLEAGVKEVYIGNIWLLGDYY
Sequences:
>Translated_385_residues MGRCLLCGREGLVASSIGVCAECLRQHPGEALELVWSRRARWRRELGLPPEPPRDPSGVPCRLCVNECRIPPGGRGYCGI WANRGGRLEPITGRGRLAVYTYLDPHPTNCVAEPVCPASTSRGYPRYTFTRGVEKGYYNLAVFMAGCPLDCIFCQNWEHK TMIAHGRIAARYVMSVEKLVEEALNPRVTCVCYFGGDPTPYMPMLIEASRRILEEARKKGQWPKRICWETDGLANPAVLR QAARLSLESGGIVKIDWKAWTPSIYEALTGVDGAKAVERLKENTRMLAEMAAERPEPPLLVVSILLVPGYVDAREVRGIA GYVAGLMEEYGVNIPVVLLAFHPDYLARDLPPTSRRHAAEARKAVLEAGVKEVYIGNIWLLGDYY >Mature_384_residues GRCLLCGREGLVASSIGVCAECLRQHPGEALELVWSRRARWRRELGLPPEPPRDPSGVPCRLCVNECRIPPGGRGYCGIW ANRGGRLEPITGRGRLAVYTYLDPHPTNCVAEPVCPASTSRGYPRYTFTRGVEKGYYNLAVFMAGCPLDCIFCQNWEHKT MIAHGRIAARYVMSVEKLVEEALNPRVTCVCYFGGDPTPYMPMLIEASRRILEEARKKGQWPKRICWETDGLANPAVLRQ AARLSLESGGIVKIDWKAWTPSIYEALTGVDGAKAVERLKENTRMLAEMAAERPEPPLLVVSILLVPGYVDAREVRGIAG YVAGLMEEYGVNIPVVLLAFHPDYLARDLPPTSRRHAAEARKAVLEAGVKEVYIGNIWLLGDYY
Specific function: Unknown
COG id: COG1180
COG function: function code O; Pyruvate-formate lyase-activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42799; Mature: 42668
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRCLLCGREGLVASSIGVCAECLRQHPGEALELVWSRRARWRRELGLPPEPPRDPSGVP CCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC CRLCVNECRIPPGGRGYCGIWANRGGRLEPITGRGRLAVYTYLDPHPTNCVAEPVCPAST HHEEHHHCCCCCCCCEEEEEEECCCCEECEECCCCCEEEEEEECCCCCCCCCCCCCCCCC SRGYPRYTFTRGVEKGYYNLAVFMAGCPLDCIFCQNWEHKTMIAHGRIAARYVMSVEKLV CCCCCCCHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCEEEECCHHHHHHHHHHHHHH EEALNPRVTCVCYFGGDPTPYMPMLIEASRRILEEARKKGQWPKRICWETDGLANPAVLR HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHH QAARLSLESGGIVKIDWKAWTPSIYEALTGVDGAKAVERLKENTRMLAEMAAERPEPPLL HHHHHEECCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH VVSILLVPGYVDAREVRGIAGYVAGLMEEYGVNIPVVLLAFHPDYLARDLPPTSRRHAAE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCHHHHHHH ARKAVLEAGVKEVYIGNIWLLGDYY HHHHHHHCCCCEEEECCEEEEECCC >Mature Secondary Structure GRCLLCGREGLVASSIGVCAECLRQHPGEALELVWSRRARWRRELGLPPEPPRDPSGVP CCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC CRLCVNECRIPPGGRGYCGIWANRGGRLEPITGRGRLAVYTYLDPHPTNCVAEPVCPAST HHEEHHHCCCCCCCCEEEEEEECCCCEECEECCCCCEEEEEEECCCCCCCCCCCCCCCCC SRGYPRYTFTRGVEKGYYNLAVFMAGCPLDCIFCQNWEHKTMIAHGRIAARYVMSVEKLV CCCCCCCHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCEEEECCHHHHHHHHHHHHHH EEALNPRVTCVCYFGGDPTPYMPMLIEASRRILEEARKKGQWPKRICWETDGLANPAVLR HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHH QAARLSLESGGIVKIDWKAWTPSIYEALTGVDGAKAVERLKENTRMLAEMAAERPEPPLL HHHHHEECCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH VVSILLVPGYVDAREVRGIAGYVAGLMEEYGVNIPVVLLAFHPDYLARDLPPTSRRHAAE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCHHHHHHH ARKAVLEAGVKEVYIGNIWLLGDYY HHHHHHHCCCCEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA