Click here to switch to the map view.

The map label for this gene is ttuD [H]

Identifier: 124027127

GI number: 124027127

Start: 217292

End: 218683

Strand: Reverse

Name: ttuD [H]

Synonym: Hbut_0230

Alternate gene names: 124027127

Gene position: 218683-217292 (Counterclockwise)

Preceding gene: 124027128

Following gene: 124027124

Centisome position: 13.12

GC content: 59.99

Gene sequence:

>1392_bases
TTGGGAAGGTTTATCCGTAACCGGGGCGTGCTTGAGAGGAGTTGGCTTCACGGTGTTGTCCTCGACTCTCTTGAGGCTGC
CTTGGAGCATGTTCACCCCTCCAGTGTTATTCCAAGATGGGTTACCCGGTTCGATTCTGGCTGTGTGAAGGTTAGGGGTG
CTGGCGGGTTCTGCCCCGGAGCCGTTTACGTGGCCGGTTTTGGTAAGGCTGCACCGTCTATGGCCAGGGCTCTCATCAAC
GTTCTCGGCGCCGACTTCGTCGAGGCTGGCATGGTTATTGGGCCTCCCGGTGGTGGGGGGCGTATCGGGCCCATCGAGGT
TTTGGAAGGTGATCACCCTATTCCCGGCTCTCGGACGCTGGAGGCTAGCCGTAGGCTGCTGGACTTCCTCCGGGAGCTTC
CGCGGGATAGCCTACTATTCCTCCTCGTTTCGGGCGGCGGTAGCGCCTTGTTTGAGGTACCCGCGGCGGGGGTTGAGCTG
GAGGATGTAGCTGTTGCTACCAAGTTGTTGATGGCGGCTGGCGCCGATATCTATGAGTTGAATACTGTGCGAAAGCACCT
CTCAGCGGTTAAGGGTGGCCAGTTGCTCCGCTACATAGCTGCTGAAAGGGTCGTATCACTGATACTGAGTGATGTGCCCG
GCGACGACCCGTCCCTTGTGGCTTCGGGGCCTACGGTGCCGGACCCATCAACATTCCGGGACGCCCTCCGGGTACTATCC
AGGTATGGGCTTCTGGATCGTATCCCTGTGAGGGCTAGGAGGCGCCTTGAGGCGGGGGCTGCTGGCGCCGCGAGGGAGAC
CCTGAAGCCTGGCGATCCTCTAGCCTCTAAGGCGATAAACATTATTGTTGCTAGGAATCTTGACGCGCTTACCGCCGCGG
CAGCCCTGCTGGAGTCGCACGGCGTAGCAGCAGTAGTTCTAACCGATACGCTGCGGGGGGAGGCTAGGGAGGCTGGGAGA
GTCCTAGCATCACTCGCCGAGGCCGCCGCCCGGGGGCTACCTGCATACCCCCGCAGAGCCAGGCTCGTAGCTGTTATTGC
TGGCGGCGAAACCACGGTGACTGTTCGCGGCCGAGGTGTTGGTGGGCGAAACCAGGAGCTATGCCTCTCCCTAGCACTTG
AAGCCTCAAAACTTAGGATACTCGAGAGATACGTGGCCGCATGCATAGGCACCGACGGCGTTGACGGGGCTAGCCCCGCT
GCAGGAGCCATAGTGGACGAGCAGCTCCCCAGAGAGCTTGAGGAAAAGCAGCTAGACCCCAAAGCATATCTTGACAACAA
TGATACATACACCCTCTTCTCAAGGCTCGCCAGGACCGTGGACACCGGCGGCTACACAGGGACAAACGTAAACGACGTTA
CGGTAGTGGTTGTCGAGAGGCAGGAAGCCTAG

Upstream 100 bases:

>100_bases
GCTAGGAGAGAGCTATGCATACTCCATCTTCGATTCGCTGCTTTTACCTCCACTACCTTTTTGCCGCCGTGGATCCCCTC
CTCTACGGGGTTAACGGTCT

Downstream 100 bases:

>100_bases
AAGACGCGACGTAGTGGAGTAGAATCAAAGTCTGAGTCGTTTGAAACTATTTCAGTGACACCATTACGCATGGCAACGGC
TAGGTGTACAGCGTCCTCAA

Product: putative glycerate kinase (GckA)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MGRFIRNRGVLERSWLHGVVLDSLEAALEHVHPSSVIPRWVTRFDSGCVKVRGAGGFCPGAVYVAGFGKAAPSMARALIN
VLGADFVEAGMVIGPPGGGGRIGPIEVLEGDHPIPGSRTLEASRRLLDFLRELPRDSLLFLLVSGGGSALFEVPAAGVEL
EDVAVATKLLMAAGADIYELNTVRKHLSAVKGGQLLRYIAAERVVSLILSDVPGDDPSLVASGPTVPDPSTFRDALRVLS
RYGLLDRIPVRARRRLEAGAAGAARETLKPGDPLASKAINIIVARNLDALTAAAALLESHGVAAVVLTDTLRGEAREAGR
VLASLAEAAARGLPAYPRRARLVAVIAGGETTVTVRGRGVGGRNQELCLSLALEASKLRILERYVAACIGTDGVDGASPA
AGAIVDEQLPRELEEKQLDPKAYLDNNDTYTLFSRLARTVDTGGYTGTNVNDVTVVVVERQEA

Sequences:

>Translated_463_residues
MGRFIRNRGVLERSWLHGVVLDSLEAALEHVHPSSVIPRWVTRFDSGCVKVRGAGGFCPGAVYVAGFGKAAPSMARALIN
VLGADFVEAGMVIGPPGGGGRIGPIEVLEGDHPIPGSRTLEASRRLLDFLRELPRDSLLFLLVSGGGSALFEVPAAGVEL
EDVAVATKLLMAAGADIYELNTVRKHLSAVKGGQLLRYIAAERVVSLILSDVPGDDPSLVASGPTVPDPSTFRDALRVLS
RYGLLDRIPVRARRRLEAGAAGAARETLKPGDPLASKAINIIVARNLDALTAAAALLESHGVAAVVLTDTLRGEAREAGR
VLASLAEAAARGLPAYPRRARLVAVIAGGETTVTVRGRGVGGRNQELCLSLALEASKLRILERYVAACIGTDGVDGASPA
AGAIVDEQLPRELEEKQLDPKAYLDNNDTYTLFSRLARTVDTGGYTGTNVNDVTVVVVERQEA
>Mature_462_residues
GRFIRNRGVLERSWLHGVVLDSLEAALEHVHPSSVIPRWVTRFDSGCVKVRGAGGFCPGAVYVAGFGKAAPSMARALINV
LGADFVEAGMVIGPPGGGGRIGPIEVLEGDHPIPGSRTLEASRRLLDFLRELPRDSLLFLLVSGGGSALFEVPAAGVELE
DVAVATKLLMAAGADIYELNTVRKHLSAVKGGQLLRYIAAERVVSLILSDVPGDDPSLVASGPTVPDPSTFRDALRVLSR
YGLLDRIPVRARRRLEAGAAGAARETLKPGDPLASKAINIIVARNLDALTAAAALLESHGVAAVVLTDTLRGEAREAGRV
LASLAEAAARGLPAYPRRARLVAVIAGGETTVTVRGRGVGGRNQELCLSLALEASKLRILERYVAACIGTDGVDGASPAA
GAIVDEQLPRELEEKQLDPKAYLDNNDTYTLFSRLARTVDTGGYTGTNVNDVTVVVVERQEA

Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]

COG id: COG2379

COG function: function code G; Putative glycerate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543063, Length=495, Percent_Identity=33.5353535353535, Blast_Score=182, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI193205461, Length=463, Percent_Identity=32.1814254859611, Blast_Score=182, Evalue=3e-46,
Organism=Drosophila melanogaster, GI19920578, Length=482, Percent_Identity=29.8755186721992, Blast_Score=143, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007835 [H]

Pfam domain/function: PF05161 MOFRL [H]

EC number: =1.1.1.81 [H]

Molecular weight: Translated: 48699; Mature: 48568

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFIRNRGVLERSWLHGVVLDSLEAALEHVHPSSVIPRWVTRFDSGCVKVRGAGGFCPG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCC
AVYVAGFGKAAPSMARALINVLGADFVEAGMVIGPPGGGGRIGPIEVLEGDHPIPGSRTL
HHEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCCCHH
EASRRLLDFLRELPRDSLLFLLVSGGGSALFEVPAAGVELEDVAVATKLLMAAGADIYEL
HHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHH
NTVRKHLSAVKGGQLLRYIAAERVVSLILSDVPGDDPSLVASGPTVPDPSTFRDALRVLS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHH
RYGLLDRIPVRARRRLEAGAAGAARETLKPGDPLASKAINIIVARNLDALTAAAALLESH
HCCCHHCCCHHHHHHHHCCCCCCHHHCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHC
GVAAVVLTDTLRGEAREAGRVLASLAEAAARGLPAYPRRARLVAVIAGGETTVTVRGRGV
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCC
GGRNQELCLSLALEASKLRILERYVAACIGTDGVDGASPAAGAIVDEQLPRELEEKQLDP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
KAYLDNNDTYTLFSRLARTVDTGGYTGTNVNDVTVVVVERQEA
CCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
GRFIRNRGVLERSWLHGVVLDSLEAALEHVHPSSVIPRWVTRFDSGCVKVRGAGGFCPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCC
AVYVAGFGKAAPSMARALINVLGADFVEAGMVIGPPGGGGRIGPIEVLEGDHPIPGSRTL
HHEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCCCHH
EASRRLLDFLRELPRDSLLFLLVSGGGSALFEVPAAGVELEDVAVATKLLMAAGADIYEL
HHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHH
NTVRKHLSAVKGGQLLRYIAAERVVSLILSDVPGDDPSLVASGPTVPDPSTFRDALRVLS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHH
RYGLLDRIPVRARRRLEAGAAGAARETLKPGDPLASKAINIIVARNLDALTAAAALLESH
HCCCHHCCCHHHHHHHHCCCCCCHHHCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHC
GVAAVVLTDTLRGEAREAGRVLASLAEAAARGLPAYPRRARLVAVIAGGETTVTVRGRGV
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCC
GGRNQELCLSLALEASKLRILERYVAACIGTDGVDGASPAAGAIVDEQLPRELEEKQLDP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
KAYLDNNDTYTLFSRLARTVDTGGYTGTNVNDVTVVVVERQEA
CCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]