| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027118
Identifier: 124027118
GI number: 124027118
Start: 206998
End: 208521
Strand: Reverse
Name: 124027118
Synonym: Hbut_0221
Alternate gene names: NA
Gene position: 208521-206998 (Counterclockwise)
Preceding gene: 124027119
Following gene: 124027116
Centisome position: 12.51
GC content: 57.55
Gene sequence:
>1524_bases GTGGGTGGTTATGAGGTTGTAATTACGACCGACCGTACCATGATGTCCAACCACCATGGCAAGGAGTTTATCGGGTTTAT GGCCACGGGGCCGCCTATCGGGGTGCCAGAGCGTGTTTGGATGTGGGTGGCAGCACCTAAGATAAGAGTTGATAGTGAGG GGAGACCATGGCAAGCGCCATATGGGCTCAGGAAGATCGAGGCTAAGCTGCAAGAGGCGGGGTTCAAAGCTGCTATCATC GATCCGGACCACCTCCATAAGCACCTTGACACGATGAAGGTGCTGCTGATAGGGCACCATGACTTCTTCGCCTTGGGGCC GCCGAGCAGCGAGTGGTGGATGATAACTGGCAAGGAGCCCGTTAACCGGAGGAGCTTCCGCCGCCTAATGGAGAGCCCCG CAGTGAGGAAGGCGCGGGAGAAGGGTGTACGCATTATTGTTGGCGGGCCAGCTGCATGGCAGTGGCTGTGGGAGCTAGAG TACTGGAAGAAATGGGGTGTCGATACGGTGATAGACGGAGAGGCTGAGAGGGTGATAGTAGATGTTGTCGATAAGGCGCT GAAAGGCGAACCGCTCCCCGACTACATCTACGTTGGGCCTGGCGAGTCGCCAAGCATCGAGGAGATACCCGTGATAAGGG GGGCTAGTGTTAACGGTCTCGTCGAGATAATGAGAGGGTGCCCGAGGGGCTGCAAGTTCTGCAGCGTAACGCTGAGGCCG CTACGCTTCATACCGCTGGAGAAGATAAAGGCTGAGATAGAGGTGAATAAGAGGCACGGCGTACGAGACGTGATATACCA CAGCGAGGACGTGCTGCTGTATGGTGCTGATGGCGTCAAGCCGCGGCCGGAGCCGCTGCTAAAACTGCACGAGCTATGGT ACCGTGCCACCGACGGCACCCTGGCGTGGAGCCATGCAAGCCTAGCAGCGGTCAAGTACGCGGAGGAGAACTACAAGCTC ATCTCCAGGATCATGGGGGACTACGTGCTCCGGCGGGAACGGTTCCTAGGCGTGGAGGTCGGGATTGAGACTCTGAGCGT GAACCTAGCCAGGAAGGTTATGCCCGCGAAGGCTGCTCCCTACCCTGCGGAGAAGTGGCCGGAGATAGTTGAGGATGCCT TCGCTATAATGCACGACAACTGGATAATACCAGCTGGCACCATCATACTTGGTCTCCCAGGGGAGACCCCGGACGACGTG ATGAAGACCGCTGAGGGCCTAGACCGGCTCCGCCCGTACCGCAGCCTTATCGTGCCAATGTTCTTTGTGCCCATGGGCGT GTTTAAGAATAGGGACTGGTTCCAGCGGAAGCTGCTAAAGCCCGAGCATCTGGAGGTCATGCTGAAGACTCTCGAGCACA GCCTCTACTGGGCCGAGGAGATGATCTCGAAGCTCTACCTGCGGGGCGTCGAGTACATACCGCTAAAACTCGGGCTTAAA GCCGTCATAGCCTACATAAAGTGGAAGACACGGAGACTCATGCCGAAGATTAAGGCCCGGCTAGAGGCCGCCATGAGGGC ATAG
Upstream 100 bases:
>100_bases GTGGTTGTTGACGAGACTGCGGATGAGGAGCTGAAGCAGGCGGCAATGGAGGCTGTGGGTGTGACGCAGGGCTAGGAGAC GCGGGCCAAGGTGGTGGGTC
Downstream 100 bases:
>100_bases CTCCTCGTCGAGAACCACTCTGTTCTCGATACAGCCTATCCCCCGGGCGCACGCCCTCATAACGGAGCCCGGCTCCGGGG TCTTCGCCGGTTTTCCGTCC
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: Fe-S Oxidoreductase; Radical SAM Domain Protein; Radical Sam Domain Protein; Oxidative Cyclase
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MGGYEVVITTDRTMMSNHHGKEFIGFMATGPPIGVPERVWMWVAAPKIRVDSEGRPWQAPYGLRKIEAKLQEAGFKAAII DPDHLHKHLDTMKVLLIGHHDFFALGPPSSEWWMITGKEPVNRRSFRRLMESPAVRKAREKGVRIIVGGPAAWQWLWELE YWKKWGVDTVIDGEAERVIVDVVDKALKGEPLPDYIYVGPGESPSIEEIPVIRGASVNGLVEIMRGCPRGCKFCSVTLRP LRFIPLEKIKAEIEVNKRHGVRDVIYHSEDVLLYGADGVKPRPEPLLKLHELWYRATDGTLAWSHASLAAVKYAEENYKL ISRIMGDYVLRRERFLGVEVGIETLSVNLARKVMPAKAAPYPAEKWPEIVEDAFAIMHDNWIIPAGTIILGLPGETPDDV MKTAEGLDRLRPYRSLIVPMFFVPMGVFKNRDWFQRKLLKPEHLEVMLKTLEHSLYWAEEMISKLYLRGVEYIPLKLGLK AVIAYIKWKTRRLMPKIKARLEAAMRA
Sequences:
>Translated_507_residues MGGYEVVITTDRTMMSNHHGKEFIGFMATGPPIGVPERVWMWVAAPKIRVDSEGRPWQAPYGLRKIEAKLQEAGFKAAII DPDHLHKHLDTMKVLLIGHHDFFALGPPSSEWWMITGKEPVNRRSFRRLMESPAVRKAREKGVRIIVGGPAAWQWLWELE YWKKWGVDTVIDGEAERVIVDVVDKALKGEPLPDYIYVGPGESPSIEEIPVIRGASVNGLVEIMRGCPRGCKFCSVTLRP LRFIPLEKIKAEIEVNKRHGVRDVIYHSEDVLLYGADGVKPRPEPLLKLHELWYRATDGTLAWSHASLAAVKYAEENYKL ISRIMGDYVLRRERFLGVEVGIETLSVNLARKVMPAKAAPYPAEKWPEIVEDAFAIMHDNWIIPAGTIILGLPGETPDDV MKTAEGLDRLRPYRSLIVPMFFVPMGVFKNRDWFQRKLLKPEHLEVMLKTLEHSLYWAEEMISKLYLRGVEYIPLKLGLK AVIAYIKWKTRRLMPKIKARLEAAMRA >Mature_506_residues GGYEVVITTDRTMMSNHHGKEFIGFMATGPPIGVPERVWMWVAAPKIRVDSEGRPWQAPYGLRKIEAKLQEAGFKAAIID PDHLHKHLDTMKVLLIGHHDFFALGPPSSEWWMITGKEPVNRRSFRRLMESPAVRKAREKGVRIIVGGPAAWQWLWELEY WKKWGVDTVIDGEAERVIVDVVDKALKGEPLPDYIYVGPGESPSIEEIPVIRGASVNGLVEIMRGCPRGCKFCSVTLRPL RFIPLEKIKAEIEVNKRHGVRDVIYHSEDVLLYGADGVKPRPEPLLKLHELWYRATDGTLAWSHASLAAVKYAEENYKLI SRIMGDYVLRRERFLGVEVGIETLSVNLARKVMPAKAAPYPAEKWPEIVEDAFAIMHDNWIIPAGTIILGLPGETPDDVM KTAEGLDRLRPYRSLIVPMFFVPMGVFKNRDWFQRKLLKPEHLEVMLKTLEHSLYWAEEMISKLYLRGVEYIPLKLGLKA VIAYIKWKTRRLMPKIKARLEAAMRA
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57905; Mature: 57773
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGYEVVITTDRTMMSNHHGKEFIGFMATGPPIGVPERVWMWVAAPKIRVDSEGRPWQAP CCCEEEEEEECHHHHCCCCCCHHEEEEECCCCCCCCCCEEEEEECCEEEECCCCCCCCCC YGLRKIEAKLQEAGFKAAIIDPDHLHKHLDTMKVLLIGHHDFFALGPPSSEWWMITGKEP CCHHHHHHHHHHCCCEEEEECHHHHHHHHHHEEEEEEECCCEEEECCCCCCEEEEECCCC VNRRSFRRLMESPAVRKAREKGVRIIVGGPAAWQWLWELEYWKKWGVDTVIDGEAERVIV CCHHHHHHHHHCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHH DVVDKALKGEPLPDYIYVGPGESPSIEEIPVIRGASVNGLVEIMRGCPRGCKFCSVTLRP HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECC LRFIPLEKIKAEIEVNKRHGVRDVIYHSEDVLLYGADGVKPRPEPLLKLHELWYRATDGT CCCCCHHHHHEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCC LAWSHASLAAVKYAEENYKLISRIMGDYVLRRERFLGVEVGIETLSVNLARKVMPAKAAP EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC YPAEKWPEIVEDAFAIMHDNWIIPAGTIILGLPGETPDDVMKTAEGLDRLRPYRSLIVPM CCHHHHHHHHHHHHHHHHCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH FFVPMGVFKNRDWFQRKLLKPEHLEVMLKTLEHSLYWAEEMISKLYLRGVEYIPLKLGLK HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH AVIAYIKWKTRRLMPKIKARLEAAMRA HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGYEVVITTDRTMMSNHHGKEFIGFMATGPPIGVPERVWMWVAAPKIRVDSEGRPWQAP CCEEEEEEECHHHHCCCCCCHHEEEEECCCCCCCCCCEEEEEECCEEEECCCCCCCCCC YGLRKIEAKLQEAGFKAAIIDPDHLHKHLDTMKVLLIGHHDFFALGPPSSEWWMITGKEP CCHHHHHHHHHHCCCEEEEECHHHHHHHHHHEEEEEEECCCEEEECCCCCCEEEEECCCC VNRRSFRRLMESPAVRKAREKGVRIIVGGPAAWQWLWELEYWKKWGVDTVIDGEAERVIV CCHHHHHHHHHCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHH DVVDKALKGEPLPDYIYVGPGESPSIEEIPVIRGASVNGLVEIMRGCPRGCKFCSVTLRP HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECC LRFIPLEKIKAEIEVNKRHGVRDVIYHSEDVLLYGADGVKPRPEPLLKLHELWYRATDGT CCCCCHHHHHEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCC LAWSHASLAAVKYAEENYKLISRIMGDYVLRRERFLGVEVGIETLSVNLARKVMPAKAAP EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC YPAEKWPEIVEDAFAIMHDNWIIPAGTIILGLPGETPDDVMKTAEGLDRLRPYRSLIVPM CCHHHHHHHHHHHHHHHHCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH FFVPMGVFKNRDWFQRKLLKPEHLEVMLKTLEHSLYWAEEMISKLYLRGVEYIPLKLGLK HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH AVIAYIKWKTRRLMPKIKARLEAAMRA HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA