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The map label for this gene is nuoC [H]

Identifier: 124027081

GI number: 124027081

Start: 165374

End: 165898

Strand: Reverse

Name: nuoC [H]

Synonym: Hbut_0184

Alternate gene names: 124027081

Gene position: 165898-165374 (Counterclockwise)

Preceding gene: 124027090

Following gene: 124027078

Centisome position: 9.95

GC content: 56.95

Gene sequence:

>525_bases
GTGTCCGTCCCGCTTGAGCAGCTAGCCCAGAAGCATGGTGCGAGGATTGAGAAGCGAACCAACTACCATGCCCTGGTAGT
GGAGCCCGACAGGATAAGGGAGGTCGTGGCCGAACTCAAGAACACTGGTTACGACTACTTGTTATCAATCTCAGGTGTTG
ACGAGCCCGACGCTAAGAGGATAAGGATCGTCTACCACTTCGCCCGTAGCAGCAACCCCGGCGACGTGGTCGCTGTCGAG
ACGGTTGTACCCCGCGACGAGCCAGTGATAGATAGTATACACGATGTCTACCCGGCAGCGCTCCTCCATGAACGGGAGGA
GCACGAGATGCTGGGTATAGTGTTCCGTGGCAACCCAGATTCCCGCCACCTGCTACTGCCGGAGGACTGGCCGGAGGGCG
TCTACCCGCTCAGGAAGGACTTTAAGGTGGTAGAGGAGAGCCACATGTCAACAAAGCCGAGCAAGCCTGTATGGATACTC
AAGCCGGAACTTAAGCCAAAGGATGAGGGAGAAGAGAAGGCCTAG

Upstream 100 bases:

>100_bases
CCCGGCCCTTAACCGGGCGAACCAACCCCGAATGGTTTACCGCCGGTTCTCAAAACACTTTAGCCGGCTAAATTTAAGTT
TGCAACCGGGCTGGTGCGCT

Downstream 100 bases:

>100_bases
GTCCAGTCTGCAGTGAAGAGGAGGCCATTACATAGCCTAGAAACTGCATGCGAAACCAGGATAACATCTATGGGTGCACC
CCTGCTAGGGCTTACAGCTT

Product: NAD(P)H-quinone oxidoreductase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSVPLEQLAQKHGARIEKRTNYHALVVEPDRIREVVAELKNTGYDYLLSISGVDEPDAKRIRIVYHFARSSNPGDVVAVE
TVVPRDEPVIDSIHDVYPAALLHEREEHEMLGIVFRGNPDSRHLLLPEDWPEGVYPLRKDFKVVEESHMSTKPSKPVWIL
KPELKPKDEGEEKA

Sequences:

>Translated_174_residues
MSVPLEQLAQKHGARIEKRTNYHALVVEPDRIREVVAELKNTGYDYLLSISGVDEPDAKRIRIVYHFARSSNPGDVVAVE
TVVPRDEPVIDSIHDVYPAALLHEREEHEMLGIVFRGNPDSRHLLLPEDWPEGVYPLRKDFKVVEESHMSTKPSKPVWIL
KPELKPKDEGEEKA
>Mature_173_residues
SVPLEQLAQKHGARIEKRTNYHALVVEPDRIREVVAELKNTGYDYLLSISGVDEPDAKRIRIVYHFARSSNPGDVVAVET
VVPRDEPVIDSIHDVYPAALLHEREEHEMLGIVFRGNPDSRHLLLPEDWPEGVYPLRKDFKVVEESHMSTKPSKPVWILK
PELKPKDEGEEKA

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581 [H]

Pfam domain/function: PF00329 Complex1_30kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 19889; Mature: 19758

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPLEQLAQKHGARIEKRTNYHALVVEPDRIREVVAELKNTGYDYLLSISGVDEPDAKR
CCCCHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCE
IRIVYHFARSSNPGDVVAVETVVPRDEPVIDSIHDVYPAALLHEREEHEMLGIVFRGNPD
EEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
SRHLLLPEDWPEGVYPLRKDFKVVEESHMSTKPSKPVWILKPELKPKDEGEEKA
CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SVPLEQLAQKHGARIEKRTNYHALVVEPDRIREVVAELKNTGYDYLLSISGVDEPDAKR
CCCHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCE
IRIVYHFARSSNPGDVVAVETVVPRDEPVIDSIHDVYPAALLHEREEHEMLGIVFRGNPD
EEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
SRHLLLPEDWPEGVYPLRKDFKVVEESHMSTKPSKPVWILKPELKPKDEGEEKA
CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA