| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
Click here to switch to the map view.
The map label for this gene is 124027073
Identifier: 124027073
GI number: 124027073
Start: 159214
End: 160131
Strand: Direct
Name: 124027073
Synonym: Hbut_0176
Alternate gene names: NA
Gene position: 159214-160131 (Clockwise)
Preceding gene: 124027072
Following gene: 124027075
Centisome position: 9.55
GC content: 58.5
Gene sequence:
>918_bases TTGCCCCGTCTATGCCTACCACTCGGCTATCAGTTTGACCTTGATCTCTCAATGTATCCTAGCTTTGTCTCTTCGCTCTA TGTGCGTATTGCTGCTCAACGATGGCGCCGTGTAATTGGTGCAAGTCACATAGTCTTCATCGAGTCTGGCAGAGTGTGCT GCGAGGGTGATGGATGTAGTATTGAGCTCGTCGAGAAGCTCTCTGGGCTGTGGTGTATGGAGCGCTGCCTACGGGGTATA GCTGCTTCAAAGTACTCGGAACCTCTTCGGCAGCTCCTCATGGCTTACCGCGGGCTCTCGGTGTCGGCGGCGGGTCCAGG CGACGAGCTTCTTGTGGCTTCGGCTGTTGTGCTCTCGCGTAGGACAAGTTATGCGCGGAATGTTAGGAGGTGGATGTACA TCATCTTCAAGCATACTAAATCCCTCTACGAGGCTGCGGAGAGGGCGGCGAGGCTGCCGAGCCCCCAGCCACGACTCCTC GCAGCAATACTCCACGAGCTAGCGGAAACACTCCAGGAGGGCTGTACTAGCCCGTGGAGGCTAAGGCAGAGGCTACTAGG GATACCGGGGGTAGGCCCGAAGACGGCGGATGCTATCCTCCTCTTCACTGGTTGTAGCAGCCGCGTCGCGCCGGGAGACG TGCACCTAGCGAGGTTTACGGAGATGGTGTTGGGCTGGAGGCTCCATCCTCCGCTGAAGAACCGGTGCCTACGCACAGCC AGCTGCATGGAGTGCACCTACGCGGCTAGCTGTCTCACGGGCAGGATTGTTCGGGAGTTTGGTGATGGTGCTGGGCTTGT GCAGACCCTGGCATACGTGCATGACAGCCTAGGAGGCCGAGGAGGGTGGAGGGCTAGGCTTGAGGAGGTGTTGGCCAAGC ACTATACGAGTTCTGGTGGCACCTCATCAGGGCGGTAG
Upstream 100 bases:
>100_bases GTTGTTGGAGATGTATTGTGAAACCCGTACCTTTACCTTCTTTTACCGTGTCTGAGGTTGAGTGTTGCAGGGTAGCTCTG AGGAGGGCTTTGGGCGGCTC
Downstream 100 bases:
>100_bases GCCTTTCGGGGTCGAAGCCCAGTTCTCCTCATTAGCTCGACGACGTGGGGGTATAGTATCACGTACTCTGGATCGATGTT CTCAGCCAGCCTGGGATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: DNA-(Apurinic Or Apyrimidinic Site) Lyase Conjectural
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MPRLCLPLGYQFDLDLSMYPSFVSSLYVRIAAQRWRRVIGASHIVFIESGRVCCEGDGCSIELVEKLSGLWCMERCLRGI AASKYSEPLRQLLMAYRGLSVSAAGPGDELLVASAVVLSRRTSYARNVRRWMYIIFKHTKSLYEAAERAARLPSPQPRLL AAILHELAETLQEGCTSPWRLRQRLLGIPGVGPKTADAILLFTGCSSRVAPGDVHLARFTEMVLGWRLHPPLKNRCLRTA SCMECTYAASCLTGRIVREFGDGAGLVQTLAYVHDSLGGRGGWRARLEEVLAKHYTSSGGTSSGR
Sequences:
>Translated_305_residues MPRLCLPLGYQFDLDLSMYPSFVSSLYVRIAAQRWRRVIGASHIVFIESGRVCCEGDGCSIELVEKLSGLWCMERCLRGI AASKYSEPLRQLLMAYRGLSVSAAGPGDELLVASAVVLSRRTSYARNVRRWMYIIFKHTKSLYEAAERAARLPSPQPRLL AAILHELAETLQEGCTSPWRLRQRLLGIPGVGPKTADAILLFTGCSSRVAPGDVHLARFTEMVLGWRLHPPLKNRCLRTA SCMECTYAASCLTGRIVREFGDGAGLVQTLAYVHDSLGGRGGWRARLEEVLAKHYTSSGGTSSGR >Mature_304_residues PRLCLPLGYQFDLDLSMYPSFVSSLYVRIAAQRWRRVIGASHIVFIESGRVCCEGDGCSIELVEKLSGLWCMERCLRGIA ASKYSEPLRQLLMAYRGLSVSAAGPGDELLVASAVVLSRRTSYARNVRRWMYIIFKHTKSLYEAAERAARLPSPQPRLLA AILHELAETLQEGCTSPWRLRQRLLGIPGVGPKTADAILLFTGCSSRVAPGDVHLARFTEMVLGWRLHPPLKNRCLRTAS CMECTYAASCLTGRIVREFGDGAGLVQTLAYVHDSLGGRGGWRARLEEVLAKHYTSSGGTSSGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33665; Mature: 33533
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLCLPLGYQFDLDLSMYPSFVSSLYVRIAAQRWRRVIGASHIVFIESGRVCCEGDGCS CCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCC IELVEKLSGLWCMERCLRGIAASKYSEPLRQLLMAYRGLSVSAAGPGDELLVASAVVLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHH RTSYARNVRRWMYIIFKHTKSLYEAAERAARLPSPQPRLLAAILHELAETLQEGCTSPWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH LRQRLLGIPGVGPKTADAILLFTGCSSRVAPGDVHLARFTEMVLGWRLHPPLKNRCLRTA HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH SCMECTYAASCLTGRIVREFGDGAGLVQTLAYVHDSLGGRGGWRARLEEVLAKHYTSSGG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC TSSGR CCCCC >Mature Secondary Structure PRLCLPLGYQFDLDLSMYPSFVSSLYVRIAAQRWRRVIGASHIVFIESGRVCCEGDGCS CCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCC IELVEKLSGLWCMERCLRGIAASKYSEPLRQLLMAYRGLSVSAAGPGDELLVASAVVLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHH RTSYARNVRRWMYIIFKHTKSLYEAAERAARLPSPQPRLLAAILHELAETLQEGCTSPWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH LRQRLLGIPGVGPKTADAILLFTGCSSRVAPGDVHLARFTEMVLGWRLHPPLKNRCLRTA HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH SCMECTYAASCLTGRIVREFGDGAGLVQTLAYVHDSLGGRGGWRARLEEVLAKHYTSSGG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC TSSGR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA