Click here to switch to the map view.

The map label for this gene is yufQ [H]

Identifier: 124026996

GI number: 124026996

Start: 86194

End: 87045

Strand: Reverse

Name: yufQ [H]

Synonym: Hbut_0096

Alternate gene names: 124026996

Gene position: 87045-86194 (Counterclockwise)

Preceding gene: 124026997

Following gene: 124026991

Centisome position: 5.22

GC content: 57.86

Gene sequence:

>852_bases
ATGACTAGCATAGAACTCCTAGTCCAAGGCCTAGCTCCTGCTGCAATAGTTGCTGTAGCTGCTTATGGCGAGCTGTTGAT
GGAGAGAGCTGGCATGCTGAACCTTGGGCTAGAGGGGCTAGTTTATTTCTCCTCGGCTGCGGCTGCAGCTGCTGCAGCGG
CTACTGGTAGCTTGTCAGCAGGATTTGCTGTGGGAGCCCTTGCAGGTATAGCGTTGATCCTCGTCTACTATGTTGCAGCA
ATAGTGTTTAGGGCCAACCAGGCCGTCACTGGCCTAGCAATAGTATTCCTCGGGATAGGCCTTGGTGACCTTGTTGGCAG
TAATGCTGCCGGAACCCCCCTGCCATCCCTCAGTCTCGGGGTAAAGAACTATGCCTCGCTCGCGCTACTCGTGCTTCCAG
CAGTGGTACTCTACGCCCTCCTATACCGTACATGGGTAGGATATGCTGTGAGGAGCCTTGGCGAGGATGTGGAGGCTGCA
AGGTTCCTAGGGGTGAACGTGGCAGTTTACCGGCTTGCGGTGGCGCTCACAGCTGGGGCTCTGGCGGGTATTGCTGGCGC
CTTCATCTTTCTGAGCCGGCCGGGCACGTGGAGTGCTGGAGTGGCGCTTGGCTGGGGTTGGCTCGCACTGGGCAGTGTCA
TCCTCGGCTACTGGCATCCGGTGGGAGTGGCTGCTGCAGCCTACCTCATAGGCCTGGCTAACACTTTGATAATGGTCCTT
GAGGGGCTGGGTGTGCCCGCTGTAGTGGCCGAGAATACGCCCTACATAATGGTTGTTGTGGCTCTCGCACTAGTGTCCTG
GCTGTATGAGAGGATTGGTGCGAGGCCGCCTGCCCTCATATGGCGGCGCTAA

Upstream 100 bases:

>100_bases
GGTATACCTGCAAGCCTAGTCTACGCCTTCGAAGCCATACTCGTACTCTCCGTGCTCATAGCCACAACACTCTCCAGGTA
CAAGCTCGTGGTGAGGAGGA

Downstream 100 bases:

>100_bases
GAGCCGCCAAGCCTATGCTTCCACAGCCTTTCTGCAAGAGCCCATACCTTCTCTAGGAACTCGCCGAGGGGAGTTAGGGA
TGCATCGAAACCGCTAAACG

Product: ABC-transporter, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTSIELLVQGLAPAAIVAVAAYGELLMERAGMLNLGLEGLVYFSSAAAAAAAAATGSLSAGFAVGALAGIALILVYYVAA
IVFRANQAVTGLAIVFLGIGLGDLVGSNAAGTPLPSLSLGVKNYASLALLVLPAVVLYALLYRTWVGYAVRSLGEDVEAA
RFLGVNVAVYRLAVALTAGALAGIAGAFIFLSRPGTWSAGVALGWGWLALGSVILGYWHPVGVAAAAYLIGLANTLIMVL
EGLGVPAVVAENTPYIMVVVALALVSWLYERIGARPPALIWRR

Sequences:

>Translated_283_residues
MTSIELLVQGLAPAAIVAVAAYGELLMERAGMLNLGLEGLVYFSSAAAAAAAAATGSLSAGFAVGALAGIALILVYYVAA
IVFRANQAVTGLAIVFLGIGLGDLVGSNAAGTPLPSLSLGVKNYASLALLVLPAVVLYALLYRTWVGYAVRSLGEDVEAA
RFLGVNVAVYRLAVALTAGALAGIAGAFIFLSRPGTWSAGVALGWGWLALGSVILGYWHPVGVAAAAYLIGLANTLIMVL
EGLGVPAVVAENTPYIMVVVALALVSWLYERIGARPPALIWRR
>Mature_282_residues
TSIELLVQGLAPAAIVAVAAYGELLMERAGMLNLGLEGLVYFSSAAAAAAAAATGSLSAGFAVGALAGIALILVYYVAAI
VFRANQAVTGLAIVFLGIGLGDLVGSNAAGTPLPSLSLGVKNYASLALLVLPAVVLYALLYRTWVGYAVRSLGEDVEAAR
FLGVNVAVYRLAVALTAGALAGIAGAFIFLSRPGTWSAGVALGWGWLALGSVILGYWHPVGVAAAAYLIGLANTLIMVLE
GLGVPAVVAENTPYIMVVVALALVSWLYERIGARPPALIWRR

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 28868; Mature: 28736

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIELLVQGLAPAAIVAVAAYGELLMERAGMLNLGLEGLVYFSSAAAAAAAAATGSLSA
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHH
GFAVGALAGIALILVYYVAAIVFRANQAVTGLAIVFLGIGLGDLVGSNAAGTPLPSLSLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VKNYASLALLVLPAVVLYALLYRTWVGYAVRSLGEDVEAARFLGVNVAVYRLAVALTAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGIAGAFIFLSRPGTWSAGVALGWGWLALGSVILGYWHPVGVAAAAYLIGLANTLIMVL
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGLGVPAVVAENTPYIMVVVALALVSWLYERIGARPPALIWRR
HCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSIELLVQGLAPAAIVAVAAYGELLMERAGMLNLGLEGLVYFSSAAAAAAAAATGSLSA
CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHH
GFAVGALAGIALILVYYVAAIVFRANQAVTGLAIVFLGIGLGDLVGSNAAGTPLPSLSLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VKNYASLALLVLPAVVLYALLYRTWVGYAVRSLGEDVEAARFLGVNVAVYRLAVALTAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGIAGAFIFLSRPGTWSAGVALGWGWLALGSVILGYWHPVGVAAAAYLIGLANTLIMVL
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGLGVPAVVAENTPYIMVVVALALVSWLYERIGARPPALIWRR
HCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]