| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124026987
Identifier: 124026987
GI number: 124026987
Start: 77829
End: 78977
Strand: Direct
Name: 124026987
Synonym: Hbut_0087
Alternate gene names: NA
Gene position: 77829-78977 (Clockwise)
Preceding gene: 124026983
Following gene: 124026988
Centisome position: 4.67
GC content: 57.35
Gene sequence:
>1149_bases TTGTCTGACCCTAGGCACCAAGTCCTCATAGTTGGTGGTGGTGCTGCCGGTCTTTCTGTTGCTGTGAGGGTATCCTCTGA CGCTGTTCTCGTGTCAGCTTCGCCTAGGCCTGGCTGGCCGCCGCACTGTACTGGGCTTATAAGCCCTGAGACTCTCAAGC TTCTATCTGCACATGAGGCTGTCAGCGATACCTATCGCGGGGCCGTGTTTCTCGACGCGAGGCTCCGAGAGGTGTGCCGT GTTGAGCGGAGGAGGGTACTAGCCTACCGTGTTAATAGGCCGTTGATGGAGGAAGTTTTCGCCGAGGAAGCTAGGGCTCG TGGAGTACGTATGATGTTCTCCAAGCCGGTCGTACATGTTGACTGGTTAACTGGCTGTGCAATGCTTGCCGACGGGGGGA GGATTTGCGGCGAACGGGTAGTCCTAGCGCCGGGCTACTCGCCACGCTTTGCGATGCTCTTCGGTGCCGAGCGTTGTGAG CGCCTCTACGGGGTTGAGGTCAGGGTCGTTCTTGCAAGGAGGATGCTGGATGATGTCTTCTATACCATACATGGCAGCAT CTATACACCAGAGTTCTTCGCCTGGATAGTCCCGGTCAACGCTGGCCGCGAAGCTCTCATCGGGCTTGCAGCACGCAACA AGCCCCTCGAAAGACTTGCAGCTCTGCTTGACGACCTAGCCCGCCGCGGCGTAGCAGACTATACTAGGGTCGTTAGTAGG CGTAACGGCATCATAGTTATGGGGCCGGCAGCTAAGAGGATAACTCGTGGCAAGCTTGTTGGCCTGGGCGATGTGCTATG TGCCTCGAAGCCCTTCACCGGTGGGGGCCTCTACGCAATATCGCGGCTCGCAAGCCTAGTCGCAGGCTATGCTGACAACA CTATTGCATATGGGGAGCTAGATGCTGCTTGGAGGCTGCTCCGTAGAGAGCTGCTGCTACAGCGCAAGCTTACGAAGCTG CTCCGGGTACTGCTTAGCTCTTCCCTAACAAAGCTTGTACTAGCCCCGATATGCGAGGCGGGAAGCCGGGGGCTCTGCAG CCTAGATTATGATAGGCATAGCAGTGCCGTAAGCTGCCTCTGGAAGCTGTACAGATTGTGGGGCGGTGGGAGAGTTGCCG AGGCGAGAGCTGCTGAGGAAAATAGCTGA
Upstream 100 bases:
>100_bases GCCTCTCTTTATTAACCTTAGCTCGTTTCCAGCTCATAGCCTTGGGGGTGATTGCCCCAGGCGGAGCTGACGGCCAGGAT GCCGGGTGATGTGTTTAGCC
Downstream 100 bases:
>100_bases GGAAGTCTATGGGCCCGAGAAGGCTAGACGATTCTGGAAGAGAATAGACATTATAGGCGATATCGCCATTATAAAGAAGC CCTTCGACGTTGAGCTAGAG
Product: putative dehydrogenase (flavoprotein), FixC
Products: NA
Alternate protein names: Dehydrogenase
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSDPRHQVLIVGGGAAGLSVAVRVSSDAVLVSASPRPGWPPHCTGLISPETLKLLSAHEAVSDTYRGAVFLDARLREVCR VERRRVLAYRVNRPLMEEVFAEEARARGVRMMFSKPVVHVDWLTGCAMLADGGRICGERVVLAPGYSPRFAMLFGAERCE RLYGVEVRVVLARRMLDDVFYTIHGSIYTPEFFAWIVPVNAGREALIGLAARNKPLERLAALLDDLARRGVADYTRVVSR RNGIIVMGPAAKRITRGKLVGLGDVLCASKPFTGGGLYAISRLASLVAGYADNTIAYGELDAAWRLLRRELLLQRKLTKL LRVLLSSSLTKLVLAPICEAGSRGLCSLDYDRHSSAVSCLWKLYRLWGGGRVAEARAAEENS
Sequences:
>Translated_382_residues MSDPRHQVLIVGGGAAGLSVAVRVSSDAVLVSASPRPGWPPHCTGLISPETLKLLSAHEAVSDTYRGAVFLDARLREVCR VERRRVLAYRVNRPLMEEVFAEEARARGVRMMFSKPVVHVDWLTGCAMLADGGRICGERVVLAPGYSPRFAMLFGAERCE RLYGVEVRVVLARRMLDDVFYTIHGSIYTPEFFAWIVPVNAGREALIGLAARNKPLERLAALLDDLARRGVADYTRVVSR RNGIIVMGPAAKRITRGKLVGLGDVLCASKPFTGGGLYAISRLASLVAGYADNTIAYGELDAAWRLLRRELLLQRKLTKL LRVLLSSSLTKLVLAPICEAGSRGLCSLDYDRHSSAVSCLWKLYRLWGGGRVAEARAAEENS >Mature_381_residues SDPRHQVLIVGGGAAGLSVAVRVSSDAVLVSASPRPGWPPHCTGLISPETLKLLSAHEAVSDTYRGAVFLDARLREVCRV ERRRVLAYRVNRPLMEEVFAEEARARGVRMMFSKPVVHVDWLTGCAMLADGGRICGERVVLAPGYSPRFAMLFGAERCER LYGVEVRVVLARRMLDDVFYTIHGSIYTPEFFAWIVPVNAGREALIGLAARNKPLERLAALLDDLARRGVADYTRVVSRR NGIIVMGPAAKRITRGKLVGLGDVLCASKPFTGGGLYAISRLASLVAGYADNTIAYGELDAAWRLLRRELLLQRKLTKLL RVLLSSSLTKLVLAPICEAGSRGLCSLDYDRHSSAVSCLWKLYRLWGGGRVAEARAAEENS
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41845; Mature: 41714
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPRHQVLIVGGGAAGLSVAVRVSSDAVLVSASPRPGWPPHCTGLISPETLKLLSAHEA CCCCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH VSDTYRGAVFLDARLREVCRVERRRVLAYRVNRPLMEEVFAEEARARGVRMMFSKPVVHV HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCEEE DWLTGCAMLADGGRICGERVVLAPGYSPRFAMLFGAERCERLYGVEVRVVLARRMLDDVF EHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHCHHHHHHHHCCHHHHHHHHHHHHHHH YTIHGSIYTPEFFAWIVPVNAGREALIGLAARNKPLERLAALLDDLARRGVADYTRVVSR HHHCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHC RNGIIVMGPAAKRITRGKLVGLGDVLCASKPFTGGGLYAISRLASLVAGYADNTIAYGEL CCCEEEECCCHHHHHCCCEECCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCH DAAWRLLRRELLLQRKLTKLLRVLLSSSLTKLVLAPICEAGSRGLCSLDYDRHSSAVSCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHH WKLYRLWGGGRVAEARAAEENS HHHHHHHCCCCEEHHCCCCCCC >Mature Secondary Structure SDPRHQVLIVGGGAAGLSVAVRVSSDAVLVSASPRPGWPPHCTGLISPETLKLLSAHEA CCCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH VSDTYRGAVFLDARLREVCRVERRRVLAYRVNRPLMEEVFAEEARARGVRMMFSKPVVHV HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCEEE DWLTGCAMLADGGRICGERVVLAPGYSPRFAMLFGAERCERLYGVEVRVVLARRMLDDVF EHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHCHHHHHHHHCCHHHHHHHHHHHHHHH YTIHGSIYTPEFFAWIVPVNAGREALIGLAARNKPLERLAALLDDLARRGVADYTRVVSR HHHCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHC RNGIIVMGPAAKRITRGKLVGLGDVLCASKPFTGGGLYAISRLASLVAGYADNTIAYGEL CCCEEEECCCHHHHHCCCEECCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCH DAAWRLLRRELLLQRKLTKLLRVLLSSSLTKLVLAPICEAGSRGLCSLDYDRHSSAVSCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHH WKLYRLWGGGRVAEARAAEENS HHHHHHHCCCCEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA