| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is aroG [H]
Identifier: 123967123
GI number: 123967123
Start: 1680567
End: 1681634
Strand: Reverse
Name: aroG [H]
Synonym: P9515_18901
Alternate gene names: 123967123
Gene position: 1681634-1680567 (Counterclockwise)
Preceding gene: 123967126
Following gene: 123967118
Centisome position: 98.68
GC content: 34.27
Gene sequence:
>1068_bases ATGACGACTTCATCAAATAATCAATCTTTAGAAAAAACATCTGATTTGCATGTTGTTGAAACACGTCCATTGATACCTCC AAGCAAACTTCATAATGATATACCTTTAGATTATACCTCTGCTGATACTGTCTCCAATACGAGGAGATCGATACAAAATA TTTTGCATAATAATGATCCTAGGCTATTAGTCATTGTGGGACCATGCTCAATCCACGATATTAAAGCTGCTAAAGAGTAT TCAGAATATATTCAGGAATTTAGAAAAATCTACAATGATAAATTGGAAATTGTAATGAGAGTATATTTTGAAAAACCGAG AACTACAATCGGATGGAAAGGATTGATAAATGACCCCCATTTAGATGGTTCCTACGATATTAATACAGGTTTACGTAGAG CTAGAAGCTTGCTCTCCTATCTTGCGACTAGAGGGATCCCTTCAGCTACTGAGTTGTTGGACCCCATTGTCCCTCAATAT ATTGCTGATTTAATCAGCTGGACAGCCATTGGTGCAAGGACAACTGAAAGTCAAACTCATAGAGAAATGGCTTCAGGATT ATCTATGCCAATTGGTTTTAAAAATGGTACAGATGGTTCTTTCAGTACAGCTATTAATGCGATGCAGTCTGCATCAAAAT CTCATCACTTTTTAGGCGTTAATGATCATGGTTATGCTTCTATTGTAAATACGACTGGCAATCCCGATGGGCATATAGTT TTAAGGGGTGGGTCTAAAGGAGTTAATTTTGAAAATCAACATGTAAAAGGCATATCTTCTGAATTAAAAGCCAGTAATCT TCCTCATAAGGTTATGATCGATTGTAGTCATGGTAATTCTAATAAAGACTTTAGGAAGCAATCTGATGTTCTAGAAAACG TAGCAACTCAAATTAAGAATGGTGAAAAAAATATTTTAGGAATTATGCTTGAAAGTCATCTTAAGGAAGGTAATCAAAAA CTTTCAAATAATAAAGATCTTGAATATGGGAGAAGTATTACTGATGCTTGCATTAATATAGACAAGACAAAAAATTTGCT AGAGAGTTTATATGATTCAATTTCTTAA
Upstream 100 bases:
>100_bases TCTTCATTTGTGAGGTTTAATGCCTAATCTATTGTTATTTTTAATATTGATAAGGAGAGTATTTATCAATGCTTTTTAAA ATATTCAAACTACTGAATTA
Downstream 100 bases:
>100_bases TTTATAAACCTGTAATAAAAAAGTTAAAGCAAAATGCTGATAAAATTGGCACGACAAAATTATCTACTCCAAAAAAACTT AATTGTTCAAGAATGGTAGC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTTSSNNQSLEKTSDLHVVETRPLIPPSKLHNDIPLDYTSADTVSNTRRSIQNILHNNDPRLLVIVGPCSIHDIKAAKEY SEYIQEFRKIYNDKLEIVMRVYFEKPRTTIGWKGLINDPHLDGSYDINTGLRRARSLLSYLATRGIPSATELLDPIVPQY IADLISWTAIGARTTESQTHREMASGLSMPIGFKNGTDGSFSTAINAMQSASKSHHFLGVNDHGYASIVNTTGNPDGHIV LRGGSKGVNFENQHVKGISSELKASNLPHKVMIDCSHGNSNKDFRKQSDVLENVATQIKNGEKNILGIMLESHLKEGNQK LSNNKDLEYGRSITDACINIDKTKNLLESLYDSIS
Sequences:
>Translated_355_residues MTTSSNNQSLEKTSDLHVVETRPLIPPSKLHNDIPLDYTSADTVSNTRRSIQNILHNNDPRLLVIVGPCSIHDIKAAKEY SEYIQEFRKIYNDKLEIVMRVYFEKPRTTIGWKGLINDPHLDGSYDINTGLRRARSLLSYLATRGIPSATELLDPIVPQY IADLISWTAIGARTTESQTHREMASGLSMPIGFKNGTDGSFSTAINAMQSASKSHHFLGVNDHGYASIVNTTGNPDGHIV LRGGSKGVNFENQHVKGISSELKASNLPHKVMIDCSHGNSNKDFRKQSDVLENVATQIKNGEKNILGIMLESHLKEGNQK LSNNKDLEYGRSITDACINIDKTKNLLESLYDSIS >Mature_354_residues TTSSNNQSLEKTSDLHVVETRPLIPPSKLHNDIPLDYTSADTVSNTRRSIQNILHNNDPRLLVIVGPCSIHDIKAAKEYS EYIQEFRKIYNDKLEIVMRVYFEKPRTTIGWKGLINDPHLDGSYDINTGLRRARSLLSYLATRGIPSATELLDPIVPQYI ADLISWTAIGARTTESQTHREMASGLSMPIGFKNGTDGSFSTAINAMQSASKSHHFLGVNDHGYASIVNTTGNPDGHIVL RGGSKGVNFENQHVKGISSELKASNLPHKVMIDCSHGNSNKDFRKQSDVLENVATQIKNGEKNILGIMLESHLKEGNQKL SNNKDLEYGRSITDACINIDKTKNLLESLYDSIS
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=343, Percent_Identity=54.8104956268222, Blast_Score=391, Evalue=1e-110, Organism=Escherichia coli, GI1788953, Length=341, Percent_Identity=51.3196480938416, Blast_Score=386, Evalue=1e-108, Organism=Escherichia coli, GI1787996, Length=345, Percent_Identity=48.695652173913, Blast_Score=350, Evalue=6e-98, Organism=Saccharomyces cerevisiae, GI6319726, Length=350, Percent_Identity=48.8571428571429, Blast_Score=345, Evalue=7e-96, Organism=Saccharomyces cerevisiae, GI6320240, Length=351, Percent_Identity=44.1595441595442, Blast_Score=323, Evalue=2e-89,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39343; Mature: 39212
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSNNQSLEKTSDLHVVETRPLIPPSKLHNDIPLDYTSADTVSNTRRSIQNILHNNDP CCCCCCCCCHHHHCCEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC RLLVIVGPCSIHDIKAAKEYSEYIQEFRKIYNDKLEIVMRVYFEKPRTTIGWKGLINDPH EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC LDGSYDINTGLRRARSLLSYLATRGIPSATELLDPIVPQYIADLISWTAIGARTTESQTH CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH REMASGLSMPIGFKNGTDGSFSTAINAMQSASKSHHFLGVNDHGYASIVNTTGNPDGHIV HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCCEEE LRGGSKGVNFENQHVKGISSELKASNLPHKVMIDCSHGNSNKDFRKQSDVLENVATQIKN EECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC GEKNILGIMLESHLKEGNQKLSNNKDLEYGRSITDACINIDKTKNLLESLYDSIS CCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure TTSSNNQSLEKTSDLHVVETRPLIPPSKLHNDIPLDYTSADTVSNTRRSIQNILHNNDP CCCCCCCCHHHHCCEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC RLLVIVGPCSIHDIKAAKEYSEYIQEFRKIYNDKLEIVMRVYFEKPRTTIGWKGLINDPH EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC LDGSYDINTGLRRARSLLSYLATRGIPSATELLDPIVPQYIADLISWTAIGARTTESQTH CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH REMASGLSMPIGFKNGTDGSFSTAINAMQSASKSHHFLGVNDHGYASIVNTTGNPDGHIV HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCCEEE LRGGSKGVNFENQHVKGISSELKASNLPHKVMIDCSHGNSNKDFRKQSDVLENVATQIKN EECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC GEKNILGIMLESHLKEGNQKLSNNKDLEYGRSITDACINIDKTKNLLESLYDSIS CCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]