| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is nrdG [C]
Identifier: 123967114
GI number: 123967114
Start: 1671025
End: 1671696
Strand: Direct
Name: nrdG [C]
Synonym: P9515_18811
Alternate gene names: 123967114
Gene position: 1671025-1671696 (Clockwise)
Preceding gene: 123967113
Following gene: 123967115
Centisome position: 98.05
GC content: 29.61
Gene sequence:
>672_bases ATGACAAATTTCTTACCATTAGTAGAAAAATTTCATTCATTACAAGGGGAGGGCTTTCATACAGGTCAAAGTGCATTTTT TATACGACTAGCTGGCTGTAACGTTGGATGTCCATGGTGCGATACTAAACATTCTTGGGATAAAGAAAAATTTCCTTTAA TATCAATTCAAGAAATCATAAATGAAATAAAAAGGGCTCGAAAACAAGGGGCATCTTTTTTAGTAATAACTGGTGGTGAG CCTTTACATCATAACTTAGATAATTTATGCCAAGCTATCAATGAAGAAACTTCTACGGAAAATCAAAGCCCAATTAAGAT TCATATTGAAACCAGTGGTGTAAGCAATTTGTCAGGTAGTTTTGATTGGATTACTTTATCTCCTAAAAGACACCAACCCC CAAAAACTTATTTTTTGAAAAATTGTAATGAATTAAAAATAATTATCAATGATCAAAAAGATATTGATTTTGCAATCGAT ATAAAGCAAGAAATTATGAATAAGTATCAGAATTCTTCATCAACAAAGAATTTTTATAAGTTGGATAAAAAATATTATTT ACAACCTGCATGGCAAAACGATGATGGGTTTTCCCTTACAATTGATTTTATTAAAAATAATCCTGAATGGAATTTGAGTC TTCAAACACATAAGTACTTAAAAATCAAATAA
Upstream 100 bases:
>100_bases GACCAGGAAAGCCCCATCCTTTATTTAAAGGCTTGATAAAAGCATCTCGAGAAAAATTAGAGCAATCAAAATAATATTAT TTATTTTTTTGCATTAAATA
Downstream 100 bases:
>100_bases TTTATATGAATTTAGAAAACAAATCTGCAGTAATTTTATTATCGGGTGGCTTAGATTCTTCAACTGTCACAGGCTTAGCA AAAGCCTCCAAGGCAAAGAT
Product: putative organic radical activating protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEIINEIKRARKQGASFLVITGGE PLHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGSFDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAID IKQEIMNKYQNSSSTKNFYKLDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK
Sequences:
>Translated_223_residues MTNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEIINEIKRARKQGASFLVITGGE PLHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGSFDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAID IKQEIMNKYQNSSSTKNFYKLDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK >Mature_222_residues TNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEIINEIKRARKQGASFLVITGGEP LHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGSFDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAIDI KQEIMNKYQNSSSTKNFYKLDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK
Specific function: Unknown
COG id: COG0602
COG function: function code O; Organic radical activating enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ygcF and H.influenzae HI_1189 [H]
Homologues:
Organism=Escherichia coli, GI1789139, Length=240, Percent_Identity=35, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 25767; Mature: 25635
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEII CCCHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHH NEIKRARKQGASFLVITGGEPLHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGS HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCC FDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAIDIKQEIMNKYQNSSSTKNFYK EEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCHHHH LDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK HCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEEC >Mature Secondary Structure TNFLPLVEKFHSLQGEGFHTGQSAFFIRLAGCNVGCPWCDTKHSWDKEKFPLISIQEII CCHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHH NEIKRARKQGASFLVITGGEPLHHNLDNLCQAINEETSTENQSPIKIHIETSGVSNLSGS HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCC FDWITLSPKRHQPPKTYFLKNCNELKIIINDQKDIDFAIDIKQEIMNKYQNSSSTKNFYK EEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCHHHH LDKKYYLQPAWQNDDGFSLTIDFIKNNPEWNLSLQTHKYLKIK HCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]