Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is ubiC

Identifier: 123967099

GI number: 123967099

Start: 1655830

End: 1656450

Strand: Direct

Name: ubiC

Synonym: P9515_18661

Alternate gene names: NA

Gene position: 1655830-1656450 (Clockwise)

Preceding gene: 123967098

Following gene: 123967102

Centisome position: 97.16

GC content: 30.92

Gene sequence:

>621_bases
TTGGTATCATCACTGAATAATAAACTCTTTAACTCACCAAGAATTTTATGGGAAGAGAAAGCTACTGCTTTCTTAGTTGA
AAATTCTTTACCAAAAATATCTGGCTCATGGAAATTAATGTTATTAGGTGATGGTAGTCCAACAAGACATTTACAACTTT
TAACTAATCAAGAAACAAAAATCAAATTAATATCTATGCAAATAGATCCTCTCTTTAATAAAGAAGGTCCAATAGAAATC
AATCAATTAAAAGAACCTTTAATTAGAAGGCAAGTTTGGATTAAAAATCAAAACGAAAGTCTTGCGTGGGCTGAAAGTTG
GTGGAATTCACAACAAGTCAGTGAGAATTTAAAAGCAAAAGAAGAACCAATTTGGAAAAACTTAACTCAAGATAGATCAG
AATTGTTTAGAGAAGTCGATAGCATTTCAATAGTTAATGCGAATTGGTTGGAGGAAGAATTTTGTTTTAAAGGTCCATTT
TGGTCAAGAAATTACAGATTTTTTCGTAATAAACAACCTTTAACCATTATTCGTGAGGTCTTCAACCCTCAATTAGAAAC
TTGGTTAGGTTCCTCAGGAATTCAAAATTTTTCTAATCTATATTCTTCTTCTTCGTCTTGA

Upstream 100 bases:

>100_bases
AGCTGATTTAACAGCATTACTAGTTTGGCTTAAAATAAAAGAAATAAAAAAAGAAAAGACAAATAGTTTTGTTGAAAAAA
AGTTATCATCTTAAAAGAAA

Downstream 100 bases:

>100_bases
CCTTGGAAGACTTCTCCCATTATTTAAACCACTTGTTATGTTATCTTCATCACCATTAAGATCATCAATTTTTTCAGCAG
ATCTTTGCCATCTATTAACT

Product: 4-hydroxybenzoate synthetase (chorismate lyase)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MVSSLNNKLFNSPRILWEEKATAFLVENSLPKISGSWKLMLLGDGSPTRHLQLLTNQETKIKLISMQIDPLFNKEGPIEI
NQLKEPLIRRQVWIKNQNESLAWAESWWNSQQVSENLKAKEEPIWKNLTQDRSELFREVDSISIVNANWLEEEFCFKGPF
WSRNYRFFRNKQPLTIIREVFNPQLETWLGSSGIQNFSNLYSSSSS

Sequences:

>Translated_206_residues
MVSSLNNKLFNSPRILWEEKATAFLVENSLPKISGSWKLMLLGDGSPTRHLQLLTNQETKIKLISMQIDPLFNKEGPIEI
NQLKEPLIRRQVWIKNQNESLAWAESWWNSQQVSENLKAKEEPIWKNLTQDRSELFREVDSISIVNANWLEEEFCFKGPF
WSRNYRFFRNKQPLTIIREVFNPQLETWLGSSGIQNFSNLYSSSSS
>Mature_206_residues
MVSSLNNKLFNSPRILWEEKATAFLVENSLPKISGSWKLMLLGDGSPTRHLQLLTNQETKIKLISMQIDPLFNKEGPIEI
NQLKEPLIRRQVWIKNQNESLAWAESWWNSQQVSENLKAKEEPIWKNLTQDRSELFREVDSISIVNANWLEEEFCFKGPF
WSRNYRFFRNKQPLTIIREVFNPQLETWLGSSGIQNFSNLYSSSSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24137; Mature: 24137

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSLNNKLFNSPRILWEEKATAFLVENSLPKISGSWKLMLLGDGSPTRHLQLLTNQETK
CCCCCCHHHCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCE
IKLISMQIDPLFNKEGPIEINQLKEPLIRRQVWIKNQNESLAWAESWWNSQQVSENLKAK
EEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHHHHHHCCC
EEPIWKNLTQDRSELFREVDSISIVNANWLEEEFCFKGPFWSRNYRFFRNKQPLTIIREV
CCHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHCCCCCCCCCCCEECCCCCHHHHHHH
FNPQLETWLGSSGIQNFSNLYSSSSS
HCHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MVSSLNNKLFNSPRILWEEKATAFLVENSLPKISGSWKLMLLGDGSPTRHLQLLTNQETK
CCCCCCHHHCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCE
IKLISMQIDPLFNKEGPIEINQLKEPLIRRQVWIKNQNESLAWAESWWNSQQVSENLKAK
EEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHHHHHHCCC
EEPIWKNLTQDRSELFREVDSISIVNANWLEEEFCFKGPFWSRNYRFFRNKQPLTIIREV
CCHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHCCCCCCCCCCCEECCCCCHHHHHHH
FNPQLETWLGSSGIQNFSNLYSSSSS
HCHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA