| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967094
Identifier: 123967094
GI number: 123967094
Start: 1650192
End: 1650887
Strand: Reverse
Name: 123967094
Synonym: P9515_18611
Alternate gene names: NA
Gene position: 1650887-1650192 (Counterclockwise)
Preceding gene: 123967100
Following gene: 123967093
Centisome position: 96.87
GC content: 36.35
Gene sequence:
>696_bases TTGAAGGGTCGAAGAGCTATGGCTCATTTGATTCATCTTTGGCATGAGAGAAATGCATGGTCACACAGGGTTTTGCCTCT GCTTTCTGAAATACTTGATTTAGGTAGAGTGCATAATTCTCAGATTTCAAATTTAAGGAATGGAAAGTTGTCATCCCCAG GGCCAGAAGTTTTTCTTGCTTTGGCACAAGTTAATACGATTCTTGATCAAGGTATAGATTCGATAAGGGATCAATTAGAA GAAAATCACCCAGAATTATGGAGATCATTGGAAGATTCTGCTCTGCCACTAAAAAATGACTCTGGTAAGCCATTGTCAGC AGGAGAATTATTTGAAATTTTTTCAGGATTGAAACCTCTTCCTTCATCTTTCGATTGGTATATCGAAGATCATGAAGCCT CTACATTAAGCGATGCTCTTTCTGATCATTTTTGTCAAAACAGGCCTTGGAGATATTGTAAAGTTGTCGTTATGGAGGCA TATACAAGTTCAAAGCCTTTAAGAAGAGAGCGTTTCGCGGAAGTGATAGCTGGAATAAAAGATTATACGGCAGAGGAATT AGATGGAGAATTACTTGATCTTTATGAGACATCAAAAAAACTTTCTTATTTTAGTGAGGGAGGACCTAACGCTTTTCTTA TGCATTTAAGAGATATAGCTTTTCAAAAAAAGAGAGTTTTAAAGAATGAAAAATAA
Upstream 100 bases:
>100_bases ATTGGAAGAGCTGTTTTCAAAAAGGCCGATATGTAATATTATCATACTATACTATTGATTATTTTAATTATCCGTGAGTT TAGGATATCGGGAGAAATTA
Downstream 100 bases:
>100_bases TAAAAATTATAATTTTAATTTAGCCAAAGAGATGGTTATTGCATTAGAGGAAGATTTAAAAGATATTTTTCACGAAAGAT CAAATCAAATTTATGACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKGRRAMAHLIHLWHERNAWSHRVLPLLSEILDLGRVHNSQISNLRNGKLSSPGPEVFLALAQVNTILDQGIDSIRDQLE ENHPELWRSLEDSALPLKNDSGKPLSAGELFEIFSGLKPLPSSFDWYIEDHEASTLSDALSDHFCQNRPWRYCKVVVMEA YTSSKPLRRERFAEVIAGIKDYTAEELDGELLDLYETSKKLSYFSEGGPNAFLMHLRDIAFQKKRVLKNEK
Sequences:
>Translated_231_residues MKGRRAMAHLIHLWHERNAWSHRVLPLLSEILDLGRVHNSQISNLRNGKLSSPGPEVFLALAQVNTILDQGIDSIRDQLE ENHPELWRSLEDSALPLKNDSGKPLSAGELFEIFSGLKPLPSSFDWYIEDHEASTLSDALSDHFCQNRPWRYCKVVVMEA YTSSKPLRRERFAEVIAGIKDYTAEELDGELLDLYETSKKLSYFSEGGPNAFLMHLRDIAFQKKRVLKNEK >Mature_231_residues MKGRRAMAHLIHLWHERNAWSHRVLPLLSEILDLGRVHNSQISNLRNGKLSSPGPEVFLALAQVNTILDQGIDSIRDQLE ENHPELWRSLEDSALPLKNDSGKPLSAGELFEIFSGLKPLPSSFDWYIEDHEASTLSDALSDHFCQNRPWRYCKVVVMEA YTSSKPLRRERFAEVIAGIKDYTAEELDGELLDLYETSKKLSYFSEGGPNAFLMHLRDIAFQKKRVLKNEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26457; Mature: 26457
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRRAMAHLIHLWHERNAWSHRVLPLLSEILDLGRVHNSQISNLRNGKLSSPGPEVFLA CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LAQVNTILDQGIDSIRDQLEENHPELWRSLEDSALPLKNDSGKPLSAGELFEIFSGLKPL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC PSSFDWYIEDHEASTLSDALSDHFCQNRPWRYCKVVVMEAYTSSKPLRRERFAEVIAGIK CCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DYTAEELDGELLDLYETSKKLSYFSEGGPNAFLMHLRDIAFQKKRVLKNEK HHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKGRRAMAHLIHLWHERNAWSHRVLPLLSEILDLGRVHNSQISNLRNGKLSSPGPEVFLA CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LAQVNTILDQGIDSIRDQLEENHPELWRSLEDSALPLKNDSGKPLSAGELFEIFSGLKPL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC PSSFDWYIEDHEASTLSDALSDHFCQNRPWRYCKVVVMEAYTSSKPLRRERFAEVIAGIK CCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DYTAEELDGELLDLYETSKKLSYFSEGGPNAFLMHLRDIAFQKKRVLKNEK HHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA