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The map label for this gene is ynbB [H]

Identifier: 123967093

GI number: 123967093

Start: 1648910

End: 1650202

Strand: Reverse

Name: ynbB [H]

Synonym: P9515_18601

Alternate gene names: 123967093

Gene position: 1650202-1648910 (Counterclockwise)

Preceding gene: 123967094

Following gene: 123967092

Centisome position: 96.83

GC content: 32.33

Gene sequence:

>1293_bases
ATGAAAAATAATAAAAATTATAATTTTAATTTAGCCAAAGAGATGGTTATTGCATTAGAGGAAGATTTAAAAGATATTTT
TCACGAAAGATCAAATCAAATTTATGACAAATTACAGAATATCTTGAGAATTTTTAATGAAGAAAAAGTCTCAACTATTC
ATTTCAATCAATCAACAGGTAGTGGGCATGATGATTTATCTAGACAAAAGATTGATGATGTATTTGCAAAATTTTTTCTT
GCAGAAAAGTCAGCTGTAAGAATGCAATTTGTAAGCGGGACTCACGCGATAAGTTCCGTTCTTTTTGGAATTTTGCGTCC
CGGTGATTTAATGTTATCTGTTACAGGCAATCCCTACGATACCTTGGAGGAAGTGATAGGTATTAGAGGAAAGGGAAAAG
GTTCTTTATTAGATTTAGGAGTTGAATATCGACAAATTAGTATTGATGAAAAAACAAATTCGTACGATGAAAAACTTATA
ACTTTTTTTAAAAATAATAAATGTAAATTAGTATTTATCCAGAAAAGTTGTGGTTATAGTTGGAGAAAATCTTTAAATAA
TAATCAAATCAAACATATCTGCAATCTCGTTCATTCTCTTAGTCCTGGGTGTATTTGTTTTGTTGATAATTGTTATGGAG
AGCTTGTAGAAGAAAGTGAACCAATTACCAACGGTGCAAATATAATCGCTGGATCACTAATTAAAAACTTGGGTGGGACA
ATTGTTCCTACTGGTGGATACATTGCAGGTGATTCTGAATTAGTTGAAATGGCATGTTGTAGGTTAACTGCACCAGGAAT
TGGAGCCGATGCAGGAATTAACTTTGGTTGTGGCAGATTAATTCTGCAGGGATTATTTTTAGCACCTCAAATGGTGCATG
AATCTCTCAAAGGTGCCGATTTGGTTGCTGCCGTTTTTCAAAAACTAGGTTTTATGGTTTTACCAAAGCCAAAGTCTTAC
AGGTCAGACATAATTCAAGCAGTTAGATTAAATAATCCACACTTAATACAAAAAGTATGTCAATCGTTTCAAAATTCTTC
ACCGATAGATTCTTTTTTAAGTGTCATTCCTTCTCCAATGAGTGGTTATGATTCAAATTTATTAATGTCAGGAGGCACGT
TTATTGAAGGAAGTACAAGTGAATTTTCAGCTGATGCTCCTTTACGAGATCCATATAATATTTTTGTTCAAGGTGGTTCT
CACATGGCTCACATCAAAATTGCTTTAATTCAATTAGTATTTGAGTTATTAGAAGAAAATCTAATTGAAAGGGAATCTCT
CATTTTTTCATAA

Upstream 100 bases:

>100_bases
GAGACATCAAAAAAACTTTCTTATTTTAGTGAGGGAGGACCTAACGCTTTTCTTATGCATTTAAGAGATATAGCTTTTCA
AAAAAAGAGAGTTTTAAAGA

Downstream 100 bases:

>100_bases
ATTTTATTATGTCCTATAAGTTTCCGAATAATTTAAAGTATGCCGATACACATGAATATGTAAAGGAAGAAAATGGATTG
TTAAAAATTGGTGTTAGTGA

Product: cystathionine beta-lyase family aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKNNKNYNFNLAKEMVIALEEDLKDIFHERSNQIYDKLQNILRIFNEEKVSTIHFNQSTGSGHDDLSRQKIDDVFAKFFL
AEKSAVRMQFVSGTHAISSVLFGILRPGDLMLSVTGNPYDTLEEVIGIRGKGKGSLLDLGVEYRQISIDEKTNSYDEKLI
TFFKNNKCKLVFIQKSCGYSWRKSLNNNQIKHICNLVHSLSPGCICFVDNCYGELVEESEPITNGANIIAGSLIKNLGGT
IVPTGGYIAGDSELVEMACCRLTAPGIGADAGINFGCGRLILQGLFLAPQMVHESLKGADLVAAVFQKLGFMVLPKPKSY
RSDIIQAVRLNNPHLIQKVCQSFQNSSPIDSFLSVIPSPMSGYDSNLLMSGGTFIEGSTSEFSADAPLRDPYNIFVQGGS
HMAHIKIALIQLVFELLEENLIERESLIFS

Sequences:

>Translated_430_residues
MKNNKNYNFNLAKEMVIALEEDLKDIFHERSNQIYDKLQNILRIFNEEKVSTIHFNQSTGSGHDDLSRQKIDDVFAKFFL
AEKSAVRMQFVSGTHAISSVLFGILRPGDLMLSVTGNPYDTLEEVIGIRGKGKGSLLDLGVEYRQISIDEKTNSYDEKLI
TFFKNNKCKLVFIQKSCGYSWRKSLNNNQIKHICNLVHSLSPGCICFVDNCYGELVEESEPITNGANIIAGSLIKNLGGT
IVPTGGYIAGDSELVEMACCRLTAPGIGADAGINFGCGRLILQGLFLAPQMVHESLKGADLVAAVFQKLGFMVLPKPKSY
RSDIIQAVRLNNPHLIQKVCQSFQNSSPIDSFLSVIPSPMSGYDSNLLMSGGTFIEGSTSEFSADAPLRDPYNIFVQGGS
HMAHIKIALIQLVFELLEENLIERESLIFS
>Mature_430_residues
MKNNKNYNFNLAKEMVIALEEDLKDIFHERSNQIYDKLQNILRIFNEEKVSTIHFNQSTGSGHDDLSRQKIDDVFAKFFL
AEKSAVRMQFVSGTHAISSVLFGILRPGDLMLSVTGNPYDTLEEVIGIRGKGKGSLLDLGVEYRQISIDEKTNSYDEKLI
TFFKNNKCKLVFIQKSCGYSWRKSLNNNQIKHICNLVHSLSPGCICFVDNCYGELVEESEPITNGANIIAGSLIKNLGGT
IVPTGGYIAGDSELVEMACCRLTAPGIGADAGINFGCGRLILQGLFLAPQMVHESLKGADLVAAVFQKLGFMVLPKPKSY
RSDIIQAVRLNNPHLIQKVCQSFQNSSPIDSFLSVIPSPMSGYDSNLLMSGGTFIEGSTSEFSADAPLRDPYNIFVQGGS
HMAHIKIALIQLVFELLEENLIERESLIFS

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 47525; Mature: 47525

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNKNYNFNLAKEMVIALEEDLKDIFHERSNQIYDKLQNILRIFNEEKVSTIHFNQSTG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
SGHDDLSRQKIDDVFAKFFLAEKSAVRMQFVSGTHAISSVLFGILRPGDLMLSVTGNPYD
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
TLEEVIGIRGKGKGSLLDLGVEYRQISIDEKTNSYDEKLITFFKNNKCKLVFIQKSCGYS
HHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCH
WRKSLNNNQIKHICNLVHSLSPGCICFVDNCYGELVEESEPITNGANIIAGSLIKNLGGT
HHHCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
IVPTGGYIAGDSELVEMACCRLTAPGIGADAGINFGCGRLILQGLFLAPQMVHESLKGAD
EECCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
LVAAVFQKLGFMVLPKPKSYRSDIIQAVRLNNPHLIQKVCQSFQNSSPIDSFLSVIPSPM
HHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCC
SGYDSNLLMSGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHMAHIKIALIQLVFELLEEN
CCCCCCEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
LIERESLIFS
HHHHHHHCCC
>Mature Secondary Structure
MKNNKNYNFNLAKEMVIALEEDLKDIFHERSNQIYDKLQNILRIFNEEKVSTIHFNQSTG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
SGHDDLSRQKIDDVFAKFFLAEKSAVRMQFVSGTHAISSVLFGILRPGDLMLSVTGNPYD
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
TLEEVIGIRGKGKGSLLDLGVEYRQISIDEKTNSYDEKLITFFKNNKCKLVFIQKSCGYS
HHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCH
WRKSLNNNQIKHICNLVHSLSPGCICFVDNCYGELVEESEPITNGANIIAGSLIKNLGGT
HHHCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
IVPTGGYIAGDSELVEMACCRLTAPGIGADAGINFGCGRLILQGLFLAPQMVHESLKGAD
EECCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
LVAAVFQKLGFMVLPKPKSYRSDIIQAVRLNNPHLIQKVCQSFQNSSPIDSFLSVIPSPM
HHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCC
SGYDSNLLMSGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHMAHIKIALIQLVFELLEEN
CCCCCCEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
LIERESLIFS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]