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The map label for this gene is 123967086

Identifier: 123967086

GI number: 123967086

Start: 1641278

End: 1641835

Strand: Direct

Name: 123967086

Synonym: P9515_18531

Alternate gene names: NA

Gene position: 1641278-1641835 (Clockwise)

Preceding gene: 123967085

Following gene: 123967087

Centisome position: 96.31

GC content: 28.67

Gene sequence:

>558_bases
ATGGAACTATCTTCCTTTCAATCATATTTGATAATACTTTTTGTAGTACTTGTAATAATTTCTGTTTTTGTCTTTCGACA
ATTTCTTAGAACAAGAAAGGAAGAATTAAATTTAGTTACATTTGAGCAAAAAGGTCTAGATTCATTCACAAAAGCTAGTG
AACTTTATGAATTTGGCTCTATACAAATTAAAAAAAGGTTGTATTCAGAGGCCACTAAGACTTTTTTAAAAGCTGTTGAT
TATTATGATGATGAACCTAATGAGGCAAAAGCTATCATAGAAAATGCTCTCGGTTTTTCCTATGCTGCGCAAAATAAATT
TAAAAAAGCAATCATACACTATAATTCAGCTATAAAATCTCTTCCAGAATATACAGTAGCTTTAAATAATCTTGCTTCAG
CACAACAACGATTACTCGAATATGAATTAGCGTATGCAACTTATAAAAAAGTTTTATTAATAGATCCAAACAACAAAACA
GCAATCAAGAAGAGTAAAGAACTACAACAAAGGAATAATTACTCTCCTTATAAAGGAATAAAAGATAAAGGGTTTTAA

Upstream 100 bases:

>100_bases
CAATTAGCTTTGAACGATCCACAATCTTTTGAGAAAATAGTTTCTGCTGTAAGCAAATAAATTATACGAATATAATTTTG
AGCAATATATTTTATCAGTA

Downstream 100 bases:

>100_bases
AAATGAAAGAAGATTCAGCCTTAATTATTGGAGGTAAAAACTTTTCAAGCCGATTAATGGTAGGCACAGGAAAGTACACA
TCTGCAGAAGTAATGGTAGA

Product: putative photosystem I assembly related protein Ycf37

Products: NA

Alternate protein names: Photosystem I Assembly Related Protein Ycf; Tetratricopeptide Repeat Domain Protein; Photosystem I Assembly Protein; Photosystem I Assembly Related Protein; Tetratricopeptide Repeat Protein; TPR Repeat-Containing Photosystem I Assembly Protein Ycf; TPR Domain-Containing Protein

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MELSSFQSYLIILFVVLVIISVFVFRQFLRTRKEELNLVTFEQKGLDSFTKASELYEFGSIQIKKRLYSEATKTFLKAVD
YYDDEPNEAKAIIENALGFSYAAQNKFKKAIIHYNSAIKSLPEYTVALNNLASAQQRLLEYELAYATYKKVLLIDPNNKT
AIKKSKELQQRNNYSPYKGIKDKGF

Sequences:

>Translated_185_residues
MELSSFQSYLIILFVVLVIISVFVFRQFLRTRKEELNLVTFEQKGLDSFTKASELYEFGSIQIKKRLYSEATKTFLKAVD
YYDDEPNEAKAIIENALGFSYAAQNKFKKAIIHYNSAIKSLPEYTVALNNLASAQQRLLEYELAYATYKKVLLIDPNNKT
AIKKSKELQQRNNYSPYKGIKDKGF
>Mature_185_residues
MELSSFQSYLIILFVVLVIISVFVFRQFLRTRKEELNLVTFEQKGLDSFTKASELYEFGSIQIKKRLYSEATKTFLKAVD
YYDDEPNEAKAIIENALGFSYAAQNKFKKAIIHYNSAIKSLPEYTVALNNLASAQQRLLEYELAYATYKKVLLIDPNNKT
AIKKSKELQQRNNYSPYKGIKDKGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21401; Mature: 21401

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSSFQSYLIILFVVLVIISVFVFRQFLRTRKEELNLVTFEQKGLDSFTKASELYEFGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHHHHHHH
IQIKKRLYSEATKTFLKAVDYYDDEPNEAKAIIENALGFSYAAQNKFKKAIIHYNSAIKS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPEYTVALNNLASAQQRLLEYELAYATYKKVLLIDPNNKTAIKKSKELQQRNNYSPYKGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
KDKGF
CCCCC
>Mature Secondary Structure
MELSSFQSYLIILFVVLVIISVFVFRQFLRTRKEELNLVTFEQKGLDSFTKASELYEFGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHHHHHHH
IQIKKRLYSEATKTFLKAVDYYDDEPNEAKAIIENALGFSYAAQNKFKKAIIHYNSAIKS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPEYTVALNNLASAQQRLLEYELAYATYKKVLLIDPNNKTAIKKSKELQQRNNYSPYKGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
KDKGF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA