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The map label for this gene is holA

Identifier: 123967070

GI number: 123967070

Start: 1621363

End: 1622364

Strand: Direct

Name: holA

Synonym: P9515_18371

Alternate gene names: NA

Gene position: 1621363-1622364 (Clockwise)

Preceding gene: 123967068

Following gene: 123967071

Centisome position: 95.14

GC content: 26.25

Gene sequence:

>1002_bases
ATGCCAATACAAATAATTTGGGGAAACGATTTAAATGCATGTAATAAGTTTATTAAAAAAATAATTGATCAAAAGGTATC
CAAAATTTGGATAGAAATAAACGTTAGCTATTTAAATGGTGATGACGATAACCAAATAAAACAAGCATTTGATGAAATAC
TAACACCTCCTTTAGGCGATGGATCAAGAGTAGTTGTATTAAAAAATAACCCAATATTTACTAACAAAAATGAGGATATA
AGGATCAAATTCGAAAAAATTTATCAAAATATTCCAGATAATACTTACTTTATTTTGCAAAACATCAAAAAACCAGACTC
AAGACTAAAAAGTACCAAATTCATTCAAAATTTAATTAAAAAAGATTTAGTACTTGAAACTTCATTTTCATTACCAGATA
TCTGGGATTATGAAGGCCAGAAAAGATACTTAGAAGTCACAGCAAATTCAATGAATATTCAACTAGGGGAAGGAGCTGCT
GAATTAATTATGAAATCAATAGGAAATGATAGTTTTAACTTAAGGAACGAATTAGCTAAAGCGAAGATATATTTATCTGC
ATCCAATAGGAACGAAACTAAAGAGCTTATTCTGAAAGTTGATGAAATTAAAAATATATTTAATGATCATCAATCAAATA
TTTTTAAAATAATTGATCATCTTTTACAAAATAATATTAACGAAAGTCTTATCGATATTCATTATTTATTAAAAAAAGGC
GAGCCTGCTTTAAGGCTTAATGCAGGATTAATAAGTCAAATCAGAATTCATACCATAGTAAAGTTACTTCATAAATCAGG
TGAGCAAGATTTACCAACAATATGTAAGATTGCTAATATATCAAATCCAAAAAGAATCTTTTTTATCCGTAAGAAAGTAA
ATAATACATCCTCAAATTTCTTAATTAAATTGATGAGTAATTTATTAGATATTGAATTCTCACTAAAAAAAGGTAATAAT
CCCTTTAATGTTTTTACAGAACATCTCGTTAACTTAAGTTAA

Upstream 100 bases:

>100_bases
AATACTTTCTAAAAAAATAGGATGATCTTTTATCATTAAAATTAAATTTATCTTATATTAAAAGTAAGCATAATTGTAAT
AAGGCTCTTTTTTATCCAAT

Downstream 100 bases:

>100_bases
CCAAATATTAAGTTAGAAAATTTATATTATGATTAAAATATGGCTTTATTAATCAAAAAATTTGGCGGCACTTCGGTTGG
TGACATTACAAAAATTAAGG

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPIQIIWGNDLNACNKFIKKIIDQKVSKIWIEINVSYLNGDDDNQIKQAFDEILTPPLGDGSRVVVLKNNPIFTNKNEDI
RIKFEKIYQNIPDNTYFILQNIKKPDSRLKSTKFIQNLIKKDLVLETSFSLPDIWDYEGQKRYLEVTANSMNIQLGEGAA
ELIMKSIGNDSFNLRNELAKAKIYLSASNRNETKELILKVDEIKNIFNDHQSNIFKIIDHLLQNNINESLIDIHYLLKKG
EPALRLNAGLISQIRIHTIVKLLHKSGEQDLPTICKIANISNPKRIFFIRKKVNNTSSNFLIKLMSNLLDIEFSLKKGNN
PFNVFTEHLVNLS

Sequences:

>Translated_333_residues
MPIQIIWGNDLNACNKFIKKIIDQKVSKIWIEINVSYLNGDDDNQIKQAFDEILTPPLGDGSRVVVLKNNPIFTNKNEDI
RIKFEKIYQNIPDNTYFILQNIKKPDSRLKSTKFIQNLIKKDLVLETSFSLPDIWDYEGQKRYLEVTANSMNIQLGEGAA
ELIMKSIGNDSFNLRNELAKAKIYLSASNRNETKELILKVDEIKNIFNDHQSNIFKIIDHLLQNNINESLIDIHYLLKKG
EPALRLNAGLISQIRIHTIVKLLHKSGEQDLPTICKIANISNPKRIFFIRKKVNNTSSNFLIKLMSNLLDIEFSLKKGNN
PFNVFTEHLVNLS
>Mature_332_residues
PIQIIWGNDLNACNKFIKKIIDQKVSKIWIEINVSYLNGDDDNQIKQAFDEILTPPLGDGSRVVVLKNNPIFTNKNEDIR
IKFEKIYQNIPDNTYFILQNIKKPDSRLKSTKFIQNLIKKDLVLETSFSLPDIWDYEGQKRYLEVTANSMNIQLGEGAAE
LIMKSIGNDSFNLRNELAKAKIYLSASNRNETKELILKVDEIKNIFNDHQSNIFKIIDHLLQNNINESLIDIHYLLKKGE
PALRLNAGLISQIRIHTIVKLLHKSGEQDLPTICKIANISNPKRIFFIRKKVNNTSSNFLIKLMSNLLDIEFSLKKGNNP
FNVFTEHLVNLS

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 38335; Mature: 38204

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIQIIWGNDLNACNKFIKKIIDQKVSKIWIEINVSYLNGDDDNQIKQAFDEILTPPLGD
CCEEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCC
GSRVVVLKNNPIFTNKNEDIRIKFEKIYQNIPDNTYFILQNIKKPDSRLKSTKFIQNLIK
CCEEEEECCCCEEECCCCCEEEEHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
KDLVLETSFSLPDIWDYEGQKRYLEVTANSMNIQLGEGAAELIMKSIGNDSFNLRNELAK
HHHEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCCHHHHHHHHHCCCCCHHHHHHHH
AKIYLSASNRNETKELILKVDEIKNIFNDHQSNIFKIIDHLLQNNINESLIDIHYLLKKG
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
EPALRLNAGLISQIRIHTIVKLLHKSGEQDLPTICKIANISNPKRIFFIRKKVNNTSSNF
CCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHH
LIKLMSNLLDIEFSLKKGNNPFNVFTEHLVNLS
HHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PIQIIWGNDLNACNKFIKKIIDQKVSKIWIEINVSYLNGDDDNQIKQAFDEILTPPLGD
CEEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCC
GSRVVVLKNNPIFTNKNEDIRIKFEKIYQNIPDNTYFILQNIKKPDSRLKSTKFIQNLIK
CCEEEEECCCCEEECCCCCEEEEHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
KDLVLETSFSLPDIWDYEGQKRYLEVTANSMNIQLGEGAAELIMKSIGNDSFNLRNELAK
HHHEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCCHHHHHHHHHCCCCCHHHHHHHH
AKIYLSASNRNETKELILKVDEIKNIFNDHQSNIFKIIDHLLQNNINESLIDIHYLLKKG
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
EPALRLNAGLISQIRIHTIVKLLHKSGEQDLPTICKIANISNPKRIFFIRKKVNNTSSNF
CCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHH
LIKLMSNLLDIEFSLKKGNNPFNVFTEHLVNLS
HHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA