| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967064
Identifier: 123967064
GI number: 123967064
Start: 1614712
End: 1615731
Strand: Reverse
Name: 123967064
Synonym: P9515_18311
Alternate gene names: NA
Gene position: 1615731-1614712 (Counterclockwise)
Preceding gene: 123967065
Following gene: 123967063
Centisome position: 94.81
GC content: 30.49
Gene sequence:
>1020_bases ATGATTAAATTACTAAAGAGGTTAATAAAAAAATCTCTAAGATTTATTGTCAAGCTCTTGACTAAGCCATTTATAAGGTC CGAGTTATATACATATTCTAATTATCAAAGATTGATTGATATTCAACCTAAGAAATTATCTAGGACTGATACAAACAAAA TAATTTTTAAGTTTATCAAATCACATGAACCTTTTATGGTTGGAAGATTTGGTTGGACAGAGATTGATACTCTCATTCAC TATGAAAATTTTCTAAAAATGAATTCACTAGAAAAATTACATGAATGGTCTTTAACTTTGAGATATCCTTTCTCTAAAAA TTGTCTTTTGAATGATATTCATCGACAATCTGGGTTTTATCCAGTTACCCAAAAAAATATTGGTTTGTTTAGAGAGGAAA TGATTTCTTCAATGAAGAGTGTTGATCTATTAGCCTCTTGGGTTAAAGGTGAGTCTAAATATCAAAAGTATTTGCCAAAT GCGCAGGTTTGCAAATTAGATTGTATTGAACCTTATCTATCAAATAATCCTTGGTCTGAAGCCCTAGAAGGATTAAAAGT ATTAGTAGTCCATCCTTTTACGGAAAGTATTTACGATCAATATAAACAAAACCGTTCTAATATTTTCAAAGATAAAAAAG TTCTTCCTAAATTCGAATTGAAATTAATAAAAGCACCTCAAACACTTCCCGGTGATAGTTATAGGTTTTCGAATTGGTTT GAAACATTAGATGCCTTAACAGAAGAAACTTGTCAAACAGATTTTGACATTGCTTTAATTGGTTGTGGAGCGTATGGCTT TCCTTTGGCTTCAAGAATTAAAAAGTTAGGAAAAAAAAGTATCCATTTAGGTGGCGCAACTCAAATAATGTTTGGAATCA AGGGTAAGAGATGGGACCAAGAACCAGTATTTATGAATTTTTATAATGAATTTTGGAAATATCCCTCTATGAATGAAAAA CCAAAAGGTTACTTTGGCATTGATAGAGGTTGTTATTGGGATCCTAATAATGATCAATAG
Upstream 100 bases:
>100_bases ATCAATTGAACTTAAAATCTCCTATGAAAAGTAAATAGAATAAAATTATTACACCATAATAAGGTAAGTATATTTTATTG ATTTAGGTTCTTATCTACCA
Downstream 100 bases:
>100_bases AAAAAATAAAAAAATTATTCATGTCATTAACTTATTTAAAATGTGTAAGATGAAATTGATCCTGTTTTAAATATGACAAA AACTATTTCTATAGAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIKLLKRLIKKSLRFIVKLLTKPFIRSELYTYSNYQRLIDIQPKKLSRTDTNKIIFKFIKSHEPFMVGRFGWTEIDTLIH YENFLKMNSLEKLHEWSLTLRYPFSKNCLLNDIHRQSGFYPVTQKNIGLFREEMISSMKSVDLLASWVKGESKYQKYLPN AQVCKLDCIEPYLSNNPWSEALEGLKVLVVHPFTESIYDQYKQNRSNIFKDKKVLPKFELKLIKAPQTLPGDSYRFSNWF ETLDALTEETCQTDFDIALIGCGAYGFPLASRIKKLGKKSIHLGGATQIMFGIKGKRWDQEPVFMNFYNEFWKYPSMNEK PKGYFGIDRGCYWDPNNDQ
Sequences:
>Translated_339_residues MIKLLKRLIKKSLRFIVKLLTKPFIRSELYTYSNYQRLIDIQPKKLSRTDTNKIIFKFIKSHEPFMVGRFGWTEIDTLIH YENFLKMNSLEKLHEWSLTLRYPFSKNCLLNDIHRQSGFYPVTQKNIGLFREEMISSMKSVDLLASWVKGESKYQKYLPN AQVCKLDCIEPYLSNNPWSEALEGLKVLVVHPFTESIYDQYKQNRSNIFKDKKVLPKFELKLIKAPQTLPGDSYRFSNWF ETLDALTEETCQTDFDIALIGCGAYGFPLASRIKKLGKKSIHLGGATQIMFGIKGKRWDQEPVFMNFYNEFWKYPSMNEK PKGYFGIDRGCYWDPNNDQ >Mature_339_residues MIKLLKRLIKKSLRFIVKLLTKPFIRSELYTYSNYQRLIDIQPKKLSRTDTNKIIFKFIKSHEPFMVGRFGWTEIDTLIH YENFLKMNSLEKLHEWSLTLRYPFSKNCLLNDIHRQSGFYPVTQKNIGLFREEMISSMKSVDLLASWVKGESKYQKYLPN AQVCKLDCIEPYLSNNPWSEALEGLKVLVVHPFTESIYDQYKQNRSNIFKDKKVLPKFELKLIKAPQTLPGDSYRFSNWF ETLDALTEETCQTDFDIALIGCGAYGFPLASRIKKLGKKSIHLGGATQIMFGIKGKRWDQEPVFMNFYNEFWKYPSMNEK PKGYFGIDRGCYWDPNNDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39914; Mature: 39914
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLLKRLIKKSLRFIVKLLTKPFIRSELYTYSNYQRLIDIQPKKLSRTDTNKIIFKFIK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCHHHHHHHHHH SHEPFMVGRFGWTEIDTLIHYENFLKMNSLEKLHEWSLTLRYPFSKNCLLNDIHRQSGFY CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCC PVTQKNIGLFREEMISSMKSVDLLASWVKGESKYQKYLPNAQVCKLDCIEPYLSNNPWSE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCHHHCCCCHHH ALEGLKVLVVHPFTESIYDQYKQNRSNIFKDKKVLPKFELKLIKAPQTLPGDSYRFSNWF HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCHHHHHH ETLDALTEETCQTDFDIALIGCGAYGFPLASRIKKLGKKSIHLGGATQIMFGIKGKRWDQ HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCHHCEECCCCEEEEEECCCCCCCC EPVFMNFYNEFWKYPSMNEKPKGYFGIDRGCYWDPNNDQ CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKLLKRLIKKSLRFIVKLLTKPFIRSELYTYSNYQRLIDIQPKKLSRTDTNKIIFKFIK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCHHHHHHHHHH SHEPFMVGRFGWTEIDTLIHYENFLKMNSLEKLHEWSLTLRYPFSKNCLLNDIHRQSGFY CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCC PVTQKNIGLFREEMISSMKSVDLLASWVKGESKYQKYLPNAQVCKLDCIEPYLSNNPWSE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCHHHCCCCHHH ALEGLKVLVVHPFTESIYDQYKQNRSNIFKDKKVLPKFELKLIKAPQTLPGDSYRFSNWF HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCHHHHHH ETLDALTEETCQTDFDIALIGCGAYGFPLASRIKKLGKKSIHLGGATQIMFGIKGKRWDQ HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCHHCEECCCCEEEEEECCCCCCCC EPVFMNFYNEFWKYPSMNEKPKGYFGIDRGCYWDPNNDQ CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA