| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is crcB
Identifier: 123967053
GI number: 123967053
Start: 1604000
End: 1604329
Strand: Reverse
Name: crcB
Synonym: P9515_18201
Alternate gene names: 123967053
Gene position: 1604329-1604000 (Counterclockwise)
Preceding gene: 123967054
Following gene: 123967052
Centisome position: 94.14
GC content: 22.73
Gene sequence:
>330_bases TTGAACAAAATCTTTTTTTTTAAAATACTATTATTTGCATACCTAGCTTCATTTTTAAGGTTCTTTTTAAATAATAATTT ACTAGTAGGAGTTATCGGTTCTTTTGTATATGGCTTTGTGATTTCAAGAAGAGTTAGTAAGTTAAAAAAAGAAATTTTAT TAACAGGTTTTTGTTCTTGTTTTACTTCGTTTAGTGGTTTCGTACTTTTTTTATATGAGATTTCTATTCAAGGTTACTTT CTAAAATTATTTTTTTATTTAAATATAATAATAGTACTGAATTTAATAATAATGTACGCAGGTTTTTTACTAGGTAGAAA AGTGACTTAA
Upstream 100 bases:
>100_bases AAAGAAAATATTTAAATTTAATCTTTTATTATATTGAAGTTTTTGTTTTATCATTTTTATTTTTTTCTTTAGGATATTTT ATAATCTTAATTCTTAAAAA
Downstream 100 bases:
>100_bases TTTTTATATAATGCTAGTGTTACCCCGATTTAGAGCAATATTATGGAAGACAATAATAATCTCGAGGTGATTACTTCTTT ATCGGCAGATTTAACTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MNKIFFFKILLFAYLASFLRFFLNNNLLVGVIGSFVYGFVISRRVSKLKKEILLTGFCSCFTSFSGFVLFLYEISIQGYF LKLFFYLNIIIVLNLIIMYAGFLLGRKVT
Sequences:
>Translated_109_residues MNKIFFFKILLFAYLASFLRFFLNNNLLVGVIGSFVYGFVISRRVSKLKKEILLTGFCSCFTSFSGFVLFLYEISIQGYF LKLFFYLNIIIVLNLIIMYAGFLLGRKVT >Mature_109_residues MNKIFFFKILLFAYLASFLRFFLNNNLLVGVIGSFVYGFVISRRVSKLKKEILLTGFCSCFTSFSGFVLFLYEISIQGYF LKLFFYLNIIIVLNLIIMYAGFLLGRKVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_PROM5 (A2BZ16)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001012134.1 - STRING: A2BZ16 - GeneID: 4719989 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_18201 - HOGENOM: HBG635100 - OMA: LNLIIMY - ProtClustDB: CLSK922236 - BioCyc: PMAR167542:P9515ORF_1901-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 12679; Mature: 12679
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1aa4220c)-; HASH(0x1b540318)-; HASH(0x1a93942c)-;
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIFFFKILLFAYLASFLRFFLNNNLLVGVIGSFVYGFVISRRVSKLKKEILLTGFCSC CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSFSGFVLFLYEISIQGYFLKLFFYLNIIIVLNLIIMYAGFLLGRKVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure MNKIFFFKILLFAYLASFLRFFLNNNLLVGVIGSFVYGFVISRRVSKLKKEILLTGFCSC CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSFSGFVLFLYEISIQGYFLKLFFYLNIIIVLNLIIMYAGFLLGRKVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA