Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123967017

Identifier: 123967017

GI number: 123967017

Start: 1569825

End: 1571177

Strand: Reverse

Name: 123967017

Synonym: P9515_17841

Alternate gene names: NA

Gene position: 1571177-1569825 (Counterclockwise)

Preceding gene: 123967018

Following gene: 123967015

Centisome position: 92.2

GC content: 26.39

Gene sequence:

>1353_bases
ATGAAGATAATTGTTATTGATGATGATCCAACAGGTTCGCAAACTGTAAATAATTGTTTGTTGCTATTGAAGTGGGATCG
TAATACTTTAATCAAAGGATTTAAAAGTAAATCTAATTTATTTTTTATTTTGGCAAATACGAGATCCTTATCAGAAAAAG
ATGCGAAATTAAGATTAGAAGATATTTGTAATGCTATTAAAAGTGTTATCTGCTCCGAAAGGTACAAAGAAAAAATTATT
ATTGTGAGTAGAGGGGATTCTACTCTTCGAGGACATAATTTTTTAGAGCCTGATGTAATAAATGATTGTTTGGGGCCTTT
TGATGCTACTTTTCATATCCCAGCATTTATTGAAGGCAAAAGGTTTACAATTGATGGACTTCATTTCGTTGATAATATTC
CTGTAAGTCAGACAATTTTTGCAAAAGATAAAATTTTTGGATTTAAGACAAGTAATATTAAAAATTTATTATTTCAGAAA
AGTAAATTGCAAATAAATTTAAATGATATCCAAAATTTAAAATCACAAGAGTTAAATATTCTCGAAACCAATGAGAATAA
TATTGTTTATAAAAAATTAAAGAATTTGAAAAAAAATTCTCATGTAATTGTAGATGTAGAGAATTATTCTCAACTTAAAA
AGTTTTCTCTAGCGATAAATAAATTAATAAAAGAAAAGAAATTTCTTTTTAGAACTGCTGCAAGTTTTATTAGTTCAATT
TCTGGAATAAAAAATAATTGCCAACAACCATTTTTTTACTCTAACCTCAGAAGAAGAAATAGAGAAAAGAAGTTTCTTCC
AGGAATGATTATTGTAGGATCTTATGTAGAACTTTCAACAATACAATTAAAACAATTTTTAGATATTAGTGATTGTGAAT
TAATAGAATTGGATGTTTTTGAATTTTATAAAATTTTTGCATCTAAACAAGAGTCAGCTAAATTAATTTTGTTTAAAAAT
AAATTTATAGATAAAATCAGATGTATCTTAAAGAAAGGAAAAACTCCAGTTATCTTTACGTCGAGAAAAGAAGTTTCTCT
TGATGATAATCATCAGCAAATAAATTTATATAATTCTCTCGCCAATTTCATTTCTGAATTGGTTGCAGATTTGAAAAATG
AAATAGGTTATTTAGTATCTAAAGGCGGAATAACTTCAAATGTTATTCTTAGCAATGGACTAAAAGCCAATTATGTTTAT
TTGCAAGGACAAATAATTACAGGGATTTCTCTAGTTACTTTAAAACTTGAAAATGAAGAGAATCTTCCAATAGTTACCTT
TCCAGGAAATATTGGCAGCCAAGAGTCATTGGTAACCGTATGGAAAATTTTAGAAAATAAAAAACTCTTATAA

Upstream 100 bases:

>100_bases
TTTAATAGATGGATTTAGAAAAATTTTGATTCCTCCTGATTTTAGCCAAGCCCTGCATGCTTCAATACAAATAAATAGTT
TTACGTAATTAAGGATACTT

Downstream 100 bases:

>100_bases
TTAAAAATTTGAGATAATTGCTTCAGCAAAACCACTGCATGAGAGTGGTTCTACCTTTGGTTCCATTAATCGGGCCAGAT
CATAGGTAACTTTTTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLEDICNAIKSVICSERYKEKII
IVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGKRFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQK
SKLQINLNDIQNLKSQELNILETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI
SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVFEFYKIFASKQESAKLILFKN
KFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSLANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVY
LQGQIITGISLVTLKLENEENLPIVTFPGNIGSQESLVTVWKILENKKLL

Sequences:

>Translated_450_residues
MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLEDICNAIKSVICSERYKEKII
IVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGKRFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQK
SKLQINLNDIQNLKSQELNILETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI
SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVFEFYKIFASKQESAKLILFKN
KFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSLANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVY
LQGQIITGISLVTLKLENEENLPIVTFPGNIGSQESLVTVWKILENKKLL
>Mature_450_residues
MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLEDICNAIKSVICSERYKEKII
IVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGKRFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQK
SKLQINLNDIQNLKSQELNILETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI
SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVFEFYKIFASKQESAKLILFKN
KFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSLANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVY
LQGQIITGISLVTLKLENEENLPIVTFPGNIGSQESLVTVWKILENKKLL

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51369; Mature: 51369

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLE
CEEEEECCCCCCCHHHCCEEEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCHHHCEEHH
DICNAIKSVICSERYKEKIIIVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGK
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEECCEEECCC
RFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQKSKLQINLNDIQNLKSQELNI
EEEECCCHHCCCCCCCCEEEECCCEEEEECCCHHHHHEECCEEEEEHHHHHCCHHCCCEE
LETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI
EEECCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVF
HHHHHCCCCCHHHHHHHHCCCCHHCCCCEEEEECCEEEHHHHHHHHCCCCCCCEEEEHHH
EFYKIFASKQESAKLILFKNKFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSL
HHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEHHHHHH
ANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVYLQGQIITGISLVTLKLENEE
HHHHHHHHHHHHHHHCEEEECCCCCEEEEEECCCEEEEEEEEEEEEECEEEEEEEECCCC
NLPIVTFPGNIGSQESLVTVWKILENKKLL
CCEEEEECCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLE
CEEEEECCCCCCCHHHCCEEEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCHHHCEEHH
DICNAIKSVICSERYKEKIIIVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGK
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEECCEEECCC
RFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQKSKLQINLNDIQNLKSQELNI
EEEECCCHHCCCCCCCCEEEECCCEEEEECCCHHHHHEECCEEEEEHHHHHCCHHCCCEE
LETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI
EEECCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVF
HHHHHCCCCCHHHHHHHHCCCCHHCCCCEEEEECCEEEHHHHHHHHCCCCCCCEEEEHHH
EFYKIFASKQESAKLILFKNKFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSL
HHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEHHHHHH
ANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVYLQGQIITGISLVTLKLENEE
HHHHHHHHHHHHHHHCEEEECCCCCEEEEEECCCEEEEEEEEEEEEECEEEEEEEECCCC
NLPIVTFPGNIGSQESLVTVWKILENKKLL
CCEEEEECCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA