| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967017
Identifier: 123967017
GI number: 123967017
Start: 1569825
End: 1571177
Strand: Reverse
Name: 123967017
Synonym: P9515_17841
Alternate gene names: NA
Gene position: 1571177-1569825 (Counterclockwise)
Preceding gene: 123967018
Following gene: 123967015
Centisome position: 92.2
GC content: 26.39
Gene sequence:
>1353_bases ATGAAGATAATTGTTATTGATGATGATCCAACAGGTTCGCAAACTGTAAATAATTGTTTGTTGCTATTGAAGTGGGATCG TAATACTTTAATCAAAGGATTTAAAAGTAAATCTAATTTATTTTTTATTTTGGCAAATACGAGATCCTTATCAGAAAAAG ATGCGAAATTAAGATTAGAAGATATTTGTAATGCTATTAAAAGTGTTATCTGCTCCGAAAGGTACAAAGAAAAAATTATT ATTGTGAGTAGAGGGGATTCTACTCTTCGAGGACATAATTTTTTAGAGCCTGATGTAATAAATGATTGTTTGGGGCCTTT TGATGCTACTTTTCATATCCCAGCATTTATTGAAGGCAAAAGGTTTACAATTGATGGACTTCATTTCGTTGATAATATTC CTGTAAGTCAGACAATTTTTGCAAAAGATAAAATTTTTGGATTTAAGACAAGTAATATTAAAAATTTATTATTTCAGAAA AGTAAATTGCAAATAAATTTAAATGATATCCAAAATTTAAAATCACAAGAGTTAAATATTCTCGAAACCAATGAGAATAA TATTGTTTATAAAAAATTAAAGAATTTGAAAAAAAATTCTCATGTAATTGTAGATGTAGAGAATTATTCTCAACTTAAAA AGTTTTCTCTAGCGATAAATAAATTAATAAAAGAAAAGAAATTTCTTTTTAGAACTGCTGCAAGTTTTATTAGTTCAATT TCTGGAATAAAAAATAATTGCCAACAACCATTTTTTTACTCTAACCTCAGAAGAAGAAATAGAGAAAAGAAGTTTCTTCC AGGAATGATTATTGTAGGATCTTATGTAGAACTTTCAACAATACAATTAAAACAATTTTTAGATATTAGTGATTGTGAAT TAATAGAATTGGATGTTTTTGAATTTTATAAAATTTTTGCATCTAAACAAGAGTCAGCTAAATTAATTTTGTTTAAAAAT AAATTTATAGATAAAATCAGATGTATCTTAAAGAAAGGAAAAACTCCAGTTATCTTTACGTCGAGAAAAGAAGTTTCTCT TGATGATAATCATCAGCAAATAAATTTATATAATTCTCTCGCCAATTTCATTTCTGAATTGGTTGCAGATTTGAAAAATG AAATAGGTTATTTAGTATCTAAAGGCGGAATAACTTCAAATGTTATTCTTAGCAATGGACTAAAAGCCAATTATGTTTAT TTGCAAGGACAAATAATTACAGGGATTTCTCTAGTTACTTTAAAACTTGAAAATGAAGAGAATCTTCCAATAGTTACCTT TCCAGGAAATATTGGCAGCCAAGAGTCATTGGTAACCGTATGGAAAATTTTAGAAAATAAAAAACTCTTATAA
Upstream 100 bases:
>100_bases TTTAATAGATGGATTTAGAAAAATTTTGATTCCTCCTGATTTTAGCCAAGCCCTGCATGCTTCAATACAAATAAATAGTT TTACGTAATTAAGGATACTT
Downstream 100 bases:
>100_bases TTAAAAATTTGAGATAATTGCTTCAGCAAAACCACTGCATGAGAGTGGTTCTACCTTTGGTTCCATTAATCGGGCCAGAT CATAGGTAACTTTTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLEDICNAIKSVICSERYKEKII IVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGKRFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQK SKLQINLNDIQNLKSQELNILETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVFEFYKIFASKQESAKLILFKN KFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSLANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVY LQGQIITGISLVTLKLENEENLPIVTFPGNIGSQESLVTVWKILENKKLL
Sequences:
>Translated_450_residues MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLEDICNAIKSVICSERYKEKII IVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGKRFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQK SKLQINLNDIQNLKSQELNILETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVFEFYKIFASKQESAKLILFKN KFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSLANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVY LQGQIITGISLVTLKLENEENLPIVTFPGNIGSQESLVTVWKILENKKLL >Mature_450_residues MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLEDICNAIKSVICSERYKEKII IVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGKRFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQK SKLQINLNDIQNLKSQELNILETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVFEFYKIFASKQESAKLILFKN KFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSLANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVY LQGQIITGISLVTLKLENEENLPIVTFPGNIGSQESLVTVWKILENKKLL
Specific function: Unknown
COG id: COG3395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51369; Mature: 51369
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLE CEEEEECCCCCCCHHHCCEEEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCHHHCEEHH DICNAIKSVICSERYKEKIIIVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGK HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEECCEEECCC RFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQKSKLQINLNDIQNLKSQELNI EEEECCCHHCCCCCCCCEEEECCCEEEEECCCHHHHHEECCEEEEEHHHHHCCHHCCCEE LETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI EEECCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVF HHHHHCCCCCHHHHHHHHCCCCHHCCCCEEEEECCEEEHHHHHHHHCCCCCCCEEEEHHH EFYKIFASKQESAKLILFKNKFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSL HHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEHHHHHH ANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVYLQGQIITGISLVTLKLENEE HHHHHHHHHHHHHHHCEEEECCCCCEEEEEECCCEEEEEEEEEEEEECEEEEEEEECCCC NLPIVTFPGNIGSQESLVTVWKILENKKLL CCEEEEECCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIIVIDDDPTGSQTVNNCLLLLKWDRNTLIKGFKSKSNLFFILANTRSLSEKDAKLRLE CEEEEECCCCCCCHHHCCEEEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCHHHCEEHH DICNAIKSVICSERYKEKIIIVSRGDSTLRGHNFLEPDVINDCLGPFDATFHIPAFIEGK HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEECCEEECCC RFTIDGLHFVDNIPVSQTIFAKDKIFGFKTSNIKNLLFQKSKLQINLNDIQNLKSQELNI EEEECCCHHCCCCCCCCEEEECCCEEEEECCCHHHHHEECCEEEEEHHHHHCCHHCCCEE LETNENNIVYKKLKNLKKNSHVIVDVENYSQLKKFSLAINKLIKEKKFLFRTAASFISSI EEECCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGIKNNCQQPFFYSNLRRRNREKKFLPGMIIVGSYVELSTIQLKQFLDISDCELIELDVF HHHHHCCCCCHHHHHHHHCCCCHHCCCCEEEEECCEEEHHHHHHHHCCCCCCCEEEEHHH EFYKIFASKQESAKLILFKNKFIDKIRCILKKGKTPVIFTSRKEVSLDDNHQQINLYNSL HHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEHHHHHH ANFISELVADLKNEIGYLVSKGGITSNVILSNGLKANYVYLQGQIITGISLVTLKLENEE HHHHHHHHHHHHHHHCEEEECCCCCEEEEEECCCEEEEEEEEEEEEECEEEEEEEECCCC NLPIVTFPGNIGSQESLVTVWKILENKKLL CCEEEEECCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA