Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966999

Identifier: 123966999

GI number: 123966999

Start: 1553256

End: 1554629

Strand: Reverse

Name: 123966999

Synonym: P9515_17661

Alternate gene names: NA

Gene position: 1554629-1553256 (Counterclockwise)

Preceding gene: 123967000

Following gene: 123966998

Centisome position: 91.22

GC content: 32.53

Gene sequence:

>1374_bases
ATGAAATCTCAAATAACTATAAAGAAAATTCAAGATTTACTTTTGCAAGGATTACATACTACATATGTTGATGATGAGAC
TTCTAGGCGGATTTGGTGGGCCTCTTTAGCGGTTATTCAAGAAAACTTCCTTTCTCATTCAGCTCAAGAAGGAGGGATTT
GGGTAGCCTCTCCTTTGCCAGCTCTAACAGAAAAAAAATGCCTAAGTAAAATGAAAGGCTGGTTATGGTCTCCCGAGGGT
TTTCCATATTTTCAAATGGATAATGCCGGGTTTTTGCCATTAGATCATTCTAGAAAAGTCAAAGAAGATAGCAGTAAATT
TAATCGTAATTACAAAGTCCTAACTTTAAATGAAAAGGATGGTTTCGAGCCTTTTTTAATAATTCTTACAAAAAATTTTC
AATGTCTTTTAACAATTGCAGGAGAAAAAAACAAAAGAAATTTACTTATGAGATGTGATGAAAAGAGTCTCAAAACTGTA
ATTGAGTTGATTGATGCGAAATTGAATCAAGAAAATTTTGAGGAGGCGCTTAATTTTCGTAATGAAATTAAAAATTTAGG
ACATCTTAATATCAATGATGAATTTGAAAAAAATTTTTGGCCTAATTTATCTTCTAAGTTGGCAAACCTAATTCCTAAAT
TAAGTGTTCAGAGTGCAGTTAAAAATGATGATGAAAAGCATCAATTAACAGAGGCAAAGTTATTACAAGTTATTTCTCAT
GAAGTCAGAACTCCTTTAGCAACAATAAGGACTTTAATAAGCTCTACTCTTAGAAAATATAATATGGACGAATCAATGAG
AAACCGTTTAATTCAAATTGATAATGAGTGTAATGAGCAAATTGATAGATTTGGTCTTATTTTCAATGCTGCGGAACTTG
TCAGTAATAATGAATCCCTCCCAAATCAATTGGCAAGAATAAATTTAGGGGAAATCTTATATAAATTGGTACCTGTTTGG
AGTAAACAATTGAAACGACGAGGAATTTCACTGGAAATTGACATACCTAAACAACTTCCTGAAATTTTGAGTGATTCAGA
AAAACTAGAATTAATGTTAAGAGGACTAATCGACAGAAACACAAGAGGATTAAGAGAAGGTAGCAGTTTAATCTTAGAGT
TACGCCCAGCGGGACAAAAATTAAAGCTTCAATTAAAAGTAAAAAAATTTGATATAGGTATTAACCAAATTGATAATAAA
GAAATAAGTTCAGATATCGGTCCAGTACTAAATTGGAATCCTCAGACAGGAAGTTTACAATTAAGTCAGATTGCCACACA
AAAATTACTGGCGAGTCTAGGAGGCCATGTTACTCAGAGAAGGGACACTGGGCTGACAGTATTTTTTCCTACTTCGGATT
CAAGTGATTTATAA

Upstream 100 bases:

>100_bases
TACCTTTCATGAGTTATGGTAGGACTTCTTTATTGATTAATTTTATATGCATTGGCTTGGCATTATCTACATTAAATCGC
TCTAGATCACTACGAAATAA

Downstream 100 bases:

>100_bases
CTGATCATATCTTTTTTCATTTATTAAATAATGTAGAAACTTTTTTAATAATTAAGAAATTTGTAAAATATGAATGCTAG
TTTCTTATAAGAAATAACTT

Product: Signal transduction histidine kinase

Products: NA

Alternate protein names: Two-Component Sensor Histidine Kinase; Sensor Histidine Kinase; Signal Transduction Histidine Kinase; Histidine Kinase A Domain Protein; Two Component System Sensor Histidine Kinase; Sensory Transduction Histidine Kinase

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLPALTEKKCLSKMKGWLWSPEG
FPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKDGFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTV
IELIDAKLNQENFEEALNFRNEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH
EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESLPNQLARINLGEILYKLVPVW
SKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRNTRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNK
EISSDIGPVLNWNPQTGSLQLSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL

Sequences:

>Translated_457_residues
MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLPALTEKKCLSKMKGWLWSPEG
FPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKDGFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTV
IELIDAKLNQENFEEALNFRNEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH
EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESLPNQLARINLGEILYKLVPVW
SKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRNTRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNK
EISSDIGPVLNWNPQTGSLQLSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL
>Mature_457_residues
MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLPALTEKKCLSKMKGWLWSPEG
FPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKDGFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTV
IELIDAKLNQENFEEALNFRNEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH
EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESLPNQLARINLGEILYKLVPVW
SKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRNTRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNK
EISSDIGPVLNWNPQTGSLQLSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52186; Mature: 52186

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLP
CCCCCHHHHHHHHHHHCHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCC
ALTEKKCLSKMKGWLWSPEGFPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKD
HHHHHHHHHHHHCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCC
GFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTVIELIDAKLNQENFEEALNFR
CCCCEEEEEECCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHH
NEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH
HHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESL
HHHCHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCH
PNQLARINLGEILYKLVPVWSKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRN
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCC
TRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNKEISSDIGPVLNWNPQTGSLQ
CCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHCCCCEECCCCCCCEE
LSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLP
CCCCCHHHHHHHHHHHCHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCC
ALTEKKCLSKMKGWLWSPEGFPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKD
HHHHHHHHHHHHCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCC
GFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTVIELIDAKLNQENFEEALNFR
CCCCEEEEEECCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHH
NEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH
HHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESL
HHHCHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCH
PNQLARINLGEILYKLVPVWSKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRN
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCC
TRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNKEISSDIGPVLNWNPQTGSLQ
CCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHCCCCEECCCCCCCEE
LSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA