| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966999
Identifier: 123966999
GI number: 123966999
Start: 1553256
End: 1554629
Strand: Reverse
Name: 123966999
Synonym: P9515_17661
Alternate gene names: NA
Gene position: 1554629-1553256 (Counterclockwise)
Preceding gene: 123967000
Following gene: 123966998
Centisome position: 91.22
GC content: 32.53
Gene sequence:
>1374_bases ATGAAATCTCAAATAACTATAAAGAAAATTCAAGATTTACTTTTGCAAGGATTACATACTACATATGTTGATGATGAGAC TTCTAGGCGGATTTGGTGGGCCTCTTTAGCGGTTATTCAAGAAAACTTCCTTTCTCATTCAGCTCAAGAAGGAGGGATTT GGGTAGCCTCTCCTTTGCCAGCTCTAACAGAAAAAAAATGCCTAAGTAAAATGAAAGGCTGGTTATGGTCTCCCGAGGGT TTTCCATATTTTCAAATGGATAATGCCGGGTTTTTGCCATTAGATCATTCTAGAAAAGTCAAAGAAGATAGCAGTAAATT TAATCGTAATTACAAAGTCCTAACTTTAAATGAAAAGGATGGTTTCGAGCCTTTTTTAATAATTCTTACAAAAAATTTTC AATGTCTTTTAACAATTGCAGGAGAAAAAAACAAAAGAAATTTACTTATGAGATGTGATGAAAAGAGTCTCAAAACTGTA ATTGAGTTGATTGATGCGAAATTGAATCAAGAAAATTTTGAGGAGGCGCTTAATTTTCGTAATGAAATTAAAAATTTAGG ACATCTTAATATCAATGATGAATTTGAAAAAAATTTTTGGCCTAATTTATCTTCTAAGTTGGCAAACCTAATTCCTAAAT TAAGTGTTCAGAGTGCAGTTAAAAATGATGATGAAAAGCATCAATTAACAGAGGCAAAGTTATTACAAGTTATTTCTCAT GAAGTCAGAACTCCTTTAGCAACAATAAGGACTTTAATAAGCTCTACTCTTAGAAAATATAATATGGACGAATCAATGAG AAACCGTTTAATTCAAATTGATAATGAGTGTAATGAGCAAATTGATAGATTTGGTCTTATTTTCAATGCTGCGGAACTTG TCAGTAATAATGAATCCCTCCCAAATCAATTGGCAAGAATAAATTTAGGGGAAATCTTATATAAATTGGTACCTGTTTGG AGTAAACAATTGAAACGACGAGGAATTTCACTGGAAATTGACATACCTAAACAACTTCCTGAAATTTTGAGTGATTCAGA AAAACTAGAATTAATGTTAAGAGGACTAATCGACAGAAACACAAGAGGATTAAGAGAAGGTAGCAGTTTAATCTTAGAGT TACGCCCAGCGGGACAAAAATTAAAGCTTCAATTAAAAGTAAAAAAATTTGATATAGGTATTAACCAAATTGATAATAAA GAAATAAGTTCAGATATCGGTCCAGTACTAAATTGGAATCCTCAGACAGGAAGTTTACAATTAAGTCAGATTGCCACACA AAAATTACTGGCGAGTCTAGGAGGCCATGTTACTCAGAGAAGGGACACTGGGCTGACAGTATTTTTTCCTACTTCGGATT CAAGTGATTTATAA
Upstream 100 bases:
>100_bases TACCTTTCATGAGTTATGGTAGGACTTCTTTATTGATTAATTTTATATGCATTGGCTTGGCATTATCTACATTAAATCGC TCTAGATCACTACGAAATAA
Downstream 100 bases:
>100_bases CTGATCATATCTTTTTTCATTTATTAAATAATGTAGAAACTTTTTTAATAATTAAGAAATTTGTAAAATATGAATGCTAG TTTCTTATAAGAAATAACTT
Product: Signal transduction histidine kinase
Products: NA
Alternate protein names: Two-Component Sensor Histidine Kinase; Sensor Histidine Kinase; Signal Transduction Histidine Kinase; Histidine Kinase A Domain Protein; Two Component System Sensor Histidine Kinase; Sensory Transduction Histidine Kinase
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLPALTEKKCLSKMKGWLWSPEG FPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKDGFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTV IELIDAKLNQENFEEALNFRNEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESLPNQLARINLGEILYKLVPVW SKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRNTRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNK EISSDIGPVLNWNPQTGSLQLSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL
Sequences:
>Translated_457_residues MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLPALTEKKCLSKMKGWLWSPEG FPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKDGFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTV IELIDAKLNQENFEEALNFRNEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESLPNQLARINLGEILYKLVPVW SKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRNTRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNK EISSDIGPVLNWNPQTGSLQLSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL >Mature_457_residues MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLPALTEKKCLSKMKGWLWSPEG FPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKDGFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTV IELIDAKLNQENFEEALNFRNEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESLPNQLARINLGEILYKLVPVW SKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRNTRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNK EISSDIGPVLNWNPQTGSLQLSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52186; Mature: 52186
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLP CCCCCHHHHHHHHHHHCHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCC ALTEKKCLSKMKGWLWSPEGFPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKD HHHHHHHHHHHHCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCC GFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTVIELIDAKLNQENFEEALNFR CCCCEEEEEECCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHH NEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH HHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESL HHHCHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCH PNQLARINLGEILYKLVPVWSKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRN HHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCC TRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNKEISSDIGPVLNWNPQTGSLQ CCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHCCCCEECCCCCCCEE LSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MKSQITIKKIQDLLLQGLHTTYVDDETSRRIWWASLAVIQENFLSHSAQEGGIWVASPLP CCCCCHHHHHHHHHHHCHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCC ALTEKKCLSKMKGWLWSPEGFPYFQMDNAGFLPLDHSRKVKEDSSKFNRNYKVLTLNEKD HHHHHHHHHHHHCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCC GFEPFLIILTKNFQCLLTIAGEKNKRNLLMRCDEKSLKTVIELIDAKLNQENFEEALNFR CCCCEEEEEECCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHH NEIKNLGHLNINDEFEKNFWPNLSSKLANLIPKLSVQSAVKNDDEKHQLTEAKLLQVISH HHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EVRTPLATIRTLISSTLRKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNNESL HHHCHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCH PNQLARINLGEILYKLVPVWSKQLKRRGISLEIDIPKQLPEILSDSEKLELMLRGLIDRN HHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCC TRGLREGSSLILELRPAGQKLKLQLKVKKFDIGINQIDNKEISSDIGPVLNWNPQTGSLQ CCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHCCCCEECCCCCCCEE LSQIATQKLLASLGGHVTQRRDTGLTVFFPTSDSSDL HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA