| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123966861
Identifier: 123966861
GI number: 123966861
Start: 1423195
End: 1423506
Strand: Reverse
Name: 123966861
Synonym: P9515_16281
Alternate gene names: NA
Gene position: 1423506-1423195 (Counterclockwise)
Preceding gene: 123966862
Following gene: 123966860
Centisome position: 83.53
GC content: 30.77
Gene sequence:
>312_bases ATGTCGGAATATAGTATTAAAGTTGAATTAAAAAAAAATGGACGTGTTTTTTTATGTCCGGTGTATCCAAATACCATAAC TTTCGCTAAAGTTATTGAAATTGATATTCCAACAAGTTGCTCTTCGGGAGTATTTACTAATACTTCCTCAATGTTAGTTG ATAGATCAGTTGAACATGAGGATGCAATTGGTTTAAAGAATGATTTGAAGGGAAAGAGTTTTGCTTATTCAAAGTCTGAT TTACATATTATTATCGGAAATGAAGCTCAAGATCATCTATCTAGTAGTCAATTTGGTAACTACCAAAAATGA
Upstream 100 bases:
>100_bases GTACTTTAAACCTTACCTATAACAAAGCAAGACAAGCTGCAATAACTCAGGAAATTTTAGAGGTGGTAGGAGGTTCAGCA GTCTAGCTGAATCCTCAAGA
Downstream 100 bases:
>100_bases AATTAATAAAGGTTGATTTTTATTTAGATTGGCCACCATCAATAAAAGTTTTTAATTTGAGGAGATTTATTATCGGAAAT CTAATGAAAAAAGGGAGAAT
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSEYSIKVELKKNGRVFLCPVYPNTITFAKVIEIDIPTSCSSGVFTNTSSMLVDRSVEHEDAIGLKNDLKGKSFAYSKSD LHIIIGNEAQDHLSSSQFGNYQK
Sequences:
>Translated_103_residues MSEYSIKVELKKNGRVFLCPVYPNTITFAKVIEIDIPTSCSSGVFTNTSSMLVDRSVEHEDAIGLKNDLKGKSFAYSKSD LHIIIGNEAQDHLSSSQFGNYQK >Mature_102_residues SEYSIKVELKKNGRVFLCPVYPNTITFAKVIEIDIPTSCSSGVFTNTSSMLVDRSVEHEDAIGLKNDLKGKSFAYSKSDL HIIIGNEAQDHLSSSQFGNYQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11434; Mature: 11303
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYSIKVELKKNGRVFLCPVYPNTITFAKVIEIDIPTSCSSGVFTNTSSMLVDRSVEHE CCCEEEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEECCCCCC DAIGLKNDLKGKSFAYSKSDLHIIIGNEAQDHLSSSQFGNYQK CCCCCCCCCCCCEEEECCCCEEEEECCCCHHHCCCCCCCCCCC >Mature Secondary Structure SEYSIKVELKKNGRVFLCPVYPNTITFAKVIEIDIPTSCSSGVFTNTSSMLVDRSVEHE CCEEEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEECCCCCC DAIGLKNDLKGKSFAYSKSDLHIIIGNEAQDHLSSSQFGNYQK CCCCCCCCCCCCEEEECCCCEEEEECCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA