| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is gpmI [H]
Identifier: 123966846
GI number: 123966846
Start: 1409109
End: 1410731
Strand: Direct
Name: gpmI [H]
Synonym: P9515_16131
Alternate gene names: 123966846
Gene position: 1409109-1410731 (Clockwise)
Preceding gene: 123966845
Following gene: 123966847
Centisome position: 82.69
GC content: 34.81
Gene sequence:
>1623_bases ATGTCAAAGATTAGCAAAAAGAATATAAATAAAATAAAAGTTACTGAGAGTCCAGTTGTTCTTGCAATTCTTGATGGTTG GGGACATAGAGAAGAAACCTCAGATAATGCCATAAAACAGGCCAATACTCCCGTAATGGATGCTTTATGGCATGCTTATC CTCATACACTTATTAGTGCGAGCGGGGCTGATGTGGGTTTGCCAAATGGCCAAATGGGTAATTCTGAAGTAGGCCATCTC ACAATTGGATCAGGAAGAATTATTCAGCAAGAACTTGTAAGGATTACGAATGTAGTTAAAAATAACCAATTAACTCAAGT ACTTGAGTTAAATAACATGGCTAATTCTATTAAGAAGAACAATGGAACCCTTCACATCACTGGCTTATGCTCAGATGGAG GAGTTCATAGCCACATTGAGCACTTATTGGGATTAATAAAATGGGCATCTGAATCTGGTTTAGACAAAGTAGCTATACAT GTTATTACTGACGGTAGAGATACCCCAGCAAAAAGTGCTTATAAATACATCAAACAAATAGAAGATTGCATAAAAGAATT CAAAGTTGGAGAAATAGCATCCATATGCGGTAGATATTGGATAATGGATAGAAATTTATTATGGGAAAGAACTGAAAAAG CTTTTATAAATCTAACTGATCCAAATCTCCAAGTAACTGATCTTTCCCCTGAAGATTATCTTAATAAAAGTTATGGCGAA AATATTACCGATGAATTTTTAGAGCCAGTAAGAATATCTAAAAAATTCTTAAAAGATGGAGATAGTTTAATATGCTTTAA TTTTCGTCCAGATAGAGCAAGACAAATAATAAAGGCTCTTTCGGAAAGAGAATTTGATAACTTTAAAAGAAACATAATAC CTGATATAGATATCTTAACTTTCACTCAATATGAAGCGAACTTACCAGTTAAAGTTGTATTTCCGCCTGAGTCTCTCAAC AACTTTATTGGCCAAATAGTTTCAGAGAACGGCCTTAAACAATACAGAACAGCTGAGACAGAAAAATATCCACACGTAAC TTATTTTTTTAATGGAGGAGTAGAAGTCCCCTCTCCTGGAGAGCATAGGCATTTAATTCCCTCTCCGAGGGTCGCAACTT ATGATATGGCTCCAGAAATGTCTGCTGAAGAATTAACTATTAGTTGCTCTAATGCTATAAAAACTGGACAATATTCTTTT GTAGTTATTAATTTCGCTAATCCTGATATGGTTGGACATACAGGTGATATGGAGGCCGCCATAAAAGCTATTGAAACTGT TGATAAATGTATAGGCAAAATAGTTAATGCTACAGGAGAGATGGGAGGCAGTATCCTTATCACTGCAGATCATGGCAATG CTGAATTAATGAAAGGTCCTGATGGGGAACCATGGACAGCCCACACTATCAATAAAGTCCCTTTAATTTTTATTGAAGGT GAGAAAAGAAAAATTCCAAATATGGGGAATGAGATTTATTTGAGAGATAATGCTGGATTAGCAGATATTGCTCCAACATT ATTACAGTTGTTAAGTCTTCCAGTTCCAAAAGAAATGACAGGAAAATCACTTATTAAAGAAATTGAATTAAAAGGATTTA ATAAAGTCGTTCAACATGTTTAA
Upstream 100 bases:
>100_bases AATTAGCAAAAGCTAACTAAATTAAATATAAATTGTATGGAACTGCTTTTACAGCTAAATTAAAGATTAATGCTTTAAAA ACTTGCATTTTATTTAAGAG
Downstream 100 bases:
>100_bases ATTAAATACATAACAAATTCTAAAAATGAGTCAAATATTTACTTGGATATGGGTTGGTTCTGGAATTCTTCTAATACTTT TAGTTTTGCTTCATAGTCCT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSKISKKNINKIKVTESPVVLAILDGWGHREETSDNAIKQANTPVMDALWHAYPHTLISASGADVGLPNGQMGNSEVGHL TIGSGRIIQQELVRITNVVKNNQLTQVLELNNMANSIKKNNGTLHITGLCSDGGVHSHIEHLLGLIKWASESGLDKVAIH VITDGRDTPAKSAYKYIKQIEDCIKEFKVGEIASICGRYWIMDRNLLWERTEKAFINLTDPNLQVTDLSPEDYLNKSYGE NITDEFLEPVRISKKFLKDGDSLICFNFRPDRARQIIKALSEREFDNFKRNIIPDIDILTFTQYEANLPVKVVFPPESLN NFIGQIVSENGLKQYRTAETEKYPHVTYFFNGGVEVPSPGEHRHLIPSPRVATYDMAPEMSAEELTISCSNAIKTGQYSF VVINFANPDMVGHTGDMEAAIKAIETVDKCIGKIVNATGEMGGSILITADHGNAELMKGPDGEPWTAHTINKVPLIFIEG EKRKIPNMGNEIYLRDNAGLADIAPTLLQLLSLPVPKEMTGKSLIKEIELKGFNKVVQHV
Sequences:
>Translated_540_residues MSKISKKNINKIKVTESPVVLAILDGWGHREETSDNAIKQANTPVMDALWHAYPHTLISASGADVGLPNGQMGNSEVGHL TIGSGRIIQQELVRITNVVKNNQLTQVLELNNMANSIKKNNGTLHITGLCSDGGVHSHIEHLLGLIKWASESGLDKVAIH VITDGRDTPAKSAYKYIKQIEDCIKEFKVGEIASICGRYWIMDRNLLWERTEKAFINLTDPNLQVTDLSPEDYLNKSYGE NITDEFLEPVRISKKFLKDGDSLICFNFRPDRARQIIKALSEREFDNFKRNIIPDIDILTFTQYEANLPVKVVFPPESLN NFIGQIVSENGLKQYRTAETEKYPHVTYFFNGGVEVPSPGEHRHLIPSPRVATYDMAPEMSAEELTISCSNAIKTGQYSF VVINFANPDMVGHTGDMEAAIKAIETVDKCIGKIVNATGEMGGSILITADHGNAELMKGPDGEPWTAHTINKVPLIFIEG EKRKIPNMGNEIYLRDNAGLADIAPTLLQLLSLPVPKEMTGKSLIKEIELKGFNKVVQHV >Mature_539_residues SKISKKNINKIKVTESPVVLAILDGWGHREETSDNAIKQANTPVMDALWHAYPHTLISASGADVGLPNGQMGNSEVGHLT IGSGRIIQQELVRITNVVKNNQLTQVLELNNMANSIKKNNGTLHITGLCSDGGVHSHIEHLLGLIKWASESGLDKVAIHV ITDGRDTPAKSAYKYIKQIEDCIKEFKVGEIASICGRYWIMDRNLLWERTEKAFINLTDPNLQVTDLSPEDYLNKSYGEN ITDEFLEPVRISKKFLKDGDSLICFNFRPDRARQIIKALSEREFDNFKRNIIPDIDILTFTQYEANLPVKVVFPPESLNN FIGQIVSENGLKQYRTAETEKYPHVTYFFNGGVEVPSPGEHRHLIPSPRVATYDMAPEMSAEELTISCSNAIKTGQYSFV VINFANPDMVGHTGDMEAAIKAIETVDKCIGKIVNATGEMGGSILITADHGNAELMKGPDGEPWTAHTINKVPLIFIEGE KRKIPNMGNEIYLRDNAGLADIAPTLLQLLSLPVPKEMTGKSLIKEIELKGFNKVVQHV
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=518, Percent_Identity=45.5598455598456, Blast_Score=468, Evalue=1e-133, Organism=Caenorhabditis elegans, GI17507741, Length=521, Percent_Identity=42.4184261036468, Blast_Score=406, Evalue=1e-113, Organism=Caenorhabditis elegans, GI32564249, Length=521, Percent_Identity=42.4184261036468, Blast_Score=405, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 59936; Mature: 59805
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKISKKNINKIKVTESPVVLAILDGWGHREETSDNAIKQANTPVMDALWHAYPHTLISA CCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHCCHHHEEC SGADVGLPNGQMGNSEVGHLTIGSGRIIQQELVRITNVVKNNQLTQVLELNNMANSIKKN CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC NGTLHITGLCSDGGVHSHIEHLLGLIKWASESGLDKVAIHVITDGRDTPAKSAYKYIKQI CCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH EDCIKEFKVGEIASICGRYWIMDRNLLWERTEKAFINLTDPNLQVTDLSPEDYLNKSYGE HHHHHHCCCHHHHHHHHHHEEECCCHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHCC NITDEFLEPVRISKKFLKDGDSLICFNFRPDRARQIIKALSEREFDNFKRNIIPDIDILT CCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE FTQYEANLPVKVVFPPESLNNFIGQIVSENGLKQYRTAETEKYPHVTYFFNGGVEVPSPG EEEECCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEECCCEECCCCC EHRHLIPSPRVATYDMAPEMSAEELTISCSNAIKTGQYSFVVINFANPDMVGHTGDMEAA CCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHH IKAIETVDKCIGKIVNATGEMGGSILITADHGNAELMKGPDGEPWTAHTINKVPLIFIEG HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCCEEEECCCCEEEEEEC EKRKIPNMGNEIYLRDNAGLADIAPTLLQLLSLPVPKEMTGKSLIKEIELKGFNKVVQHV CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKISKKNINKIKVTESPVVLAILDGWGHREETSDNAIKQANTPVMDALWHAYPHTLISA CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHCCHHHEEC SGADVGLPNGQMGNSEVGHLTIGSGRIIQQELVRITNVVKNNQLTQVLELNNMANSIKKN CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC NGTLHITGLCSDGGVHSHIEHLLGLIKWASESGLDKVAIHVITDGRDTPAKSAYKYIKQI CCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH EDCIKEFKVGEIASICGRYWIMDRNLLWERTEKAFINLTDPNLQVTDLSPEDYLNKSYGE HHHHHHCCCHHHHHHHHHHEEECCCHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHCC NITDEFLEPVRISKKFLKDGDSLICFNFRPDRARQIIKALSEREFDNFKRNIIPDIDILT CCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE FTQYEANLPVKVVFPPESLNNFIGQIVSENGLKQYRTAETEKYPHVTYFFNGGVEVPSPG EEEECCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEECCCEECCCCC EHRHLIPSPRVATYDMAPEMSAEELTISCSNAIKTGQYSFVVINFANPDMVGHTGDMEAA CCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHH IKAIETVDKCIGKIVNATGEMGGSILITADHGNAELMKGPDGEPWTAHTINKVPLIFIEG HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCCEEEECCCCEEEEEEC EKRKIPNMGNEIYLRDNAGLADIAPTLLQLLSLPVPKEMTGKSLIKEIELKGFNKVVQHV CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]