| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123966829
Identifier: 123966829
GI number: 123966829
Start: 1398550
End: 1398849
Strand: Direct
Name: 123966829
Synonym: P9515_15961
Alternate gene names: NA
Gene position: 1398550-1398849 (Clockwise)
Preceding gene: 123966828
Following gene: 123966830
Centisome position: 82.07
GC content: 34.0
Gene sequence:
>300_bases ATGATAGAAATCCTCATCACCTTGGCTCGCAAGAGTCTTTTTTTTATGTCACCTCATAAAAGTCCAAACATTATAAAATA CTGCGTAATCACATCGACAGCTGCAATAGTTTTAATAGCAATTTCTTTAATTCCTGTTTCAAGAAAAGCTACTTACTGGA ATCGCTGCCTTCATAGAACTGTTAGCTGGATTAATAACAAGGAAAAGGATTTAAAAGGTTGGGATAAACAATCAAAAGAA AGTCTTGCAGTAGCAGTATGTAATGGTGCTGTTTATGAACCTGCAATTAAAACTAAGTAA
Upstream 100 bases:
>100_bases CCCATCACCTAGCCTTTTATAAAATACTAGCACCACATATGGTGTTTGACTGTAATATTTATTACTTTAGATGGGGTTGT TTGTTTTTGTTTGATTTGCG
Downstream 100 bases:
>100_bases TTTAATTGATATAAAATCTAAACTAAATAATTAACTAACTTCTTTGTCATGTCTCCTTCAACTAAAGAATTTTCAGATAA TTTTTTTGAGTTTTATCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MIEILITLARKSLFFMSPHKSPNIIKYCVITSTAAIVLIAISLIPVSRKATYWNRCLHRTVSWINNKEKDLKGWDKQSKE SLAVAVCNGAVYEPAIKTK
Sequences:
>Translated_99_residues MIEILITLARKSLFFMSPHKSPNIIKYCVITSTAAIVLIAISLIPVSRKATYWNRCLHRTVSWINNKEKDLKGWDKQSKE SLAVAVCNGAVYEPAIKTK >Mature_99_residues MIEILITLARKSLFFMSPHKSPNIIKYCVITSTAAIVLIAISLIPVSRKATYWNRCLHRTVSWINNKEKDLKGWDKQSKE SLAVAVCNGAVYEPAIKTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11176; Mature: 11176
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEILITLARKSLFFMSPHKSPNIIKYCVITSTAAIVLIAISLIPVSRKATYWNRCLHRT CCEEEEEHHHHHHEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VSWINNKEKDLKGWDKQSKESLAVAVCNGAVYEPAIKTK HHHHCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCC >Mature Secondary Structure MIEILITLARKSLFFMSPHKSPNIIKYCVITSTAAIVLIAISLIPVSRKATYWNRCLHRT CCEEEEEHHHHHHEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VSWINNKEKDLKGWDKQSKESLAVAVCNGAVYEPAIKTK HHHHCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA