| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966815
Identifier: 123966815
GI number: 123966815
Start: 1391600
End: 1392040
Strand: Reverse
Name: 123966815
Synonym: P9515_15821
Alternate gene names: NA
Gene position: 1392040-1391600 (Counterclockwise)
Preceding gene: 123966816
Following gene: 123966814
Centisome position: 81.68
GC content: 28.8
Gene sequence:
>441_bases ATGATGTATTGCTACGGTTTAAGACCTTATGAAGTTTTCGGATCGAAAGTTAAACAAGAAAATAAAACTTGCACTGTATT AGGACTTAAGGGGGAGGAGAATCAAGTTGAGGATAGGAAAGCTTTTTCTCTAGATAAATCTTTGGTAGATGTTTTTGATT TAAATAATATTGATAGACCTTGGGAATACAATATGAATGATAAAAAATATGATGCTATTTATTCAAAAATCAAAACAGAA CAAATGAGTAAAAGATTAAAGAAAATTATTAAAAAAGAGAAATTCCCTCGATTTACAATAAATATGATTAGGCATAGTTG GGCTAAGAGAGCTATGAAATTAATGTTTTCTTCCTCTGATTGTGCAATTTCAATGGGAAACTCAATCAGGTTTTTTCATG ATAATTATATAAGTTCAGATCACAAACCTAAAAATTCTTGA
Upstream 100 bases:
>100_bases ATACATGGTAAAAACTAAACTTAACCTTGAAAATGATCAGTTACTTGAAATAGTATTAAAGTTGATGGATCTGATGTCTG AATGGAAGTGGAGTCTTGGA
Downstream 100 bases:
>100_bases ATTAAAAATGTTTAAAAACCTACTTTTCACTTCTTTTTTACTTCTAAACTTAACCGGTTTAGTTTACCCTTCAAAAAAAG AAAATACAAAATTATTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MMYCYGLRPYEVFGSKVKQENKTCTVLGLKGEENQVEDRKAFSLDKSLVDVFDLNNIDRPWEYNMNDKKYDAIYSKIKTE QMSKRLKKIIKKEKFPRFTINMIRHSWAKRAMKLMFSSSDCAISMGNSIRFFHDNYISSDHKPKNS
Sequences:
>Translated_146_residues MMYCYGLRPYEVFGSKVKQENKTCTVLGLKGEENQVEDRKAFSLDKSLVDVFDLNNIDRPWEYNMNDKKYDAIYSKIKTE QMSKRLKKIIKKEKFPRFTINMIRHSWAKRAMKLMFSSSDCAISMGNSIRFFHDNYISSDHKPKNS >Mature_146_residues MMYCYGLRPYEVFGSKVKQENKTCTVLGLKGEENQVEDRKAFSLDKSLVDVFDLNNIDRPWEYNMNDKKYDAIYSKIKTE QMSKRLKKIIKKEKFPRFTINMIRHSWAKRAMKLMFSSSDCAISMGNSIRFFHDNYISSDHKPKNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17287; Mature: 17287
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYCYGLRPYEVFGSKVKQENKTCTVLGLKGEENQVEDRKAFSLDKSLVDVFDLNNIDRP CEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC WEYNMNDKKYDAIYSKIKTEQMSKRLKKIIKKEKFPRFTINMIRHSWAKRAMKLMFSSSD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC CAISMGNSIRFFHDNYISSDHKPKNS CEEECCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MMYCYGLRPYEVFGSKVKQENKTCTVLGLKGEENQVEDRKAFSLDKSLVDVFDLNNIDRP CEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC WEYNMNDKKYDAIYSKIKTEQMSKRLKKIIKKEKFPRFTINMIRHSWAKRAMKLMFSSSD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC CAISMGNSIRFFHDNYISSDHKPKNS CEEECCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA