| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is entA [C]
Identifier: 123966757
GI number: 123966757
Start: 1356092
End: 1357021
Strand: Direct
Name: entA [C]
Synonym: P9515_15241
Alternate gene names: 123966757
Gene position: 1356092-1357021 (Clockwise)
Preceding gene: 123966756
Following gene: 123966762
Centisome position: 79.57
GC content: 33.87
Gene sequence:
>930_bases ATGACTGCAACTAATCTTAAGAATAGAAATTCCAATTGGACCATATCAGATATTCCCAATCTAGATGGCAAAACAGTTTT CATCACAGGAGCGAATAGTGGTCTTGGCTATTACACAGCTAAAGCTTTAGCAGAAAAAAATGCCCATGTTGTACTTGCTT GCAGAACTTTAGAAAAGGCTAATTCAGCCTTACACAAATTGAAGTCACTTAATCCTGAAGGAAAATTCACCCCCATTGAA TTAGACTTGGCAGATTTAAATAAAGTGAGTGAAATTGGATCAAAAATTTCAACTGAGTTTGAGAAGTTAGACTTGCTAAT TAACAATGCAGGAATAATGCATCCACCGAAAACATTAAGTCCACAAGGTTTTGAAATACAATTTGCGGTGAATCATTTAG CTCATATGCTTTTAACATTAAAATTTCTTCCTTTAATTGAAAAGCAAAAAGGATCTAGAATAGTAACAGTAACTTCTGGC GCCCAGTTTTTTGGAAAAGTTGGATGGAATAATCTAAAAGCAGAAAATTACTACAACAAATGGGAATCATACGCTAACAG TAAATTAGCTAATGTAATGTTTGCTTTAGAATTAAACGAAAAACTTGAGCAAAAACATATTCTATCTTTAGCAGCTCATC CAGGTATTGCAAAAACAAATCTTTTTTCTGCCCAGAAACCAAAGCCTAATCCAATTGAAATTTTCTCTTTAGAATTATTT AGCCCAATTTTTCAATCTGCCGAAATGGGTGCTTTACCACAATTATTTGCTGCTACTTCGCCTCAGGCAAAAGGGGGTGA ACATTACGGGCCTAAATTTAATTTTAGAGGTCACCCAAAATTATCTCCAGCTTCACCATTTGCTACAAATAAGAAAGAAA GAAAAAGTCTTTGGGAAAAGAGTATGGAAATACTTAGTAATTTTTTATGA
Upstream 100 bases:
>100_bases TTTTAAGTGGTCACGATCCTTCTGATTAGTATTTACGATAAAAATAATAAATAAGATTAATTCTTAATTAAGTTTCAACA ATCTAGATAAGTTTTCAAAA
Downstream 100 bases:
>100_bases GTTTTTTAGTTTTATTAACTTCAAAAAATATTTCAAGATATGCAATTCACTTTCTGAAAGTTTCATAAATTCAATTAATG CCTGATAATTTTCTTCATCA
Product: short-chain dehydrogenase/reductase
Products: protochlorophyllide; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTATNLKNRNSNWTISDIPNLDGKTVFITGANSGLGYYTAKALAEKNAHVVLACRTLEKANSALHKLKSLNPEGKFTPIE LDLADLNKVSEIGSKISTEFEKLDLLINNAGIMHPPKTLSPQGFEIQFAVNHLAHMLLTLKFLPLIEKQKGSRIVTVTSG AQFFGKVGWNNLKAENYYNKWESYANSKLANVMFALELNEKLEQKHILSLAAHPGIAKTNLFSAQKPKPNPIEIFSLELF SPIFQSAEMGALPQLFAATSPQAKGGEHYGPKFNFRGHPKLSPASPFATNKKERKSLWEKSMEILSNFL
Sequences:
>Translated_309_residues MTATNLKNRNSNWTISDIPNLDGKTVFITGANSGLGYYTAKALAEKNAHVVLACRTLEKANSALHKLKSLNPEGKFTPIE LDLADLNKVSEIGSKISTEFEKLDLLINNAGIMHPPKTLSPQGFEIQFAVNHLAHMLLTLKFLPLIEKQKGSRIVTVTSG AQFFGKVGWNNLKAENYYNKWESYANSKLANVMFALELNEKLEQKHILSLAAHPGIAKTNLFSAQKPKPNPIEIFSLELF SPIFQSAEMGALPQLFAATSPQAKGGEHYGPKFNFRGHPKLSPASPFATNKKERKSLWEKSMEILSNFL >Mature_308_residues TATNLKNRNSNWTISDIPNLDGKTVFITGANSGLGYYTAKALAEKNAHVVLACRTLEKANSALHKLKSLNPEGKFTPIEL DLADLNKVSEIGSKISTEFEKLDLLINNAGIMHPPKTLSPQGFEIQFAVNHLAHMLLTLKFLPLIEKQKGSRIVTVTSGA QFFGKVGWNNLKAENYYNKWESYANSKLANVMFALELNEKLEQKHILSLAAHPGIAKTNLFSAQKPKPNPIEIFSLELFS PIFQSAEMGALPQLFAATSPQAKGGEHYGPKFNFRGHPKLSPASPFATNKKERKSLWEKSMEILSNFL
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI186928839, Length=286, Percent_Identity=34.6153846153846, Blast_Score=155, Evalue=3e-38, Organism=Homo sapiens, GI10190746, Length=308, Percent_Identity=35.3896103896104, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI225579078, Length=289, Percent_Identity=34.9480968858132, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI166795268, Length=307, Percent_Identity=30.9446254071661, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI7706523, Length=299, Percent_Identity=29.4314381270903, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI146231950, Length=291, Percent_Identity=32.3024054982818, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI193804850, Length=289, Percent_Identity=29.757785467128, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI19923931, Length=255, Percent_Identity=32.5490196078431, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI13375997, Length=142, Percent_Identity=33.8028169014084, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI72534732, Length=142, Percent_Identity=33.8028169014084, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1786812, Length=204, Percent_Identity=27.9411764705882, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193207620, Length=304, Percent_Identity=28.9473684210526, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17532805, Length=314, Percent_Identity=28.343949044586, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17558006, Length=290, Percent_Identity=28.6206896551724, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17532791, Length=303, Percent_Identity=27.0627062706271, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI72001364, Length=294, Percent_Identity=29.2517006802721, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17505416, Length=211, Percent_Identity=32.7014218009479, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI71992402, Length=297, Percent_Identity=27.2727272727273, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17535059, Length=297, Percent_Identity=26.9360269360269, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI32565532, Length=218, Percent_Identity=33.4862385321101, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115533174, Length=296, Percent_Identity=26.3513513513513, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533172, Length=293, Percent_Identity=25.938566552901, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17508895, Length=210, Percent_Identity=29.0476190476191, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17558996, Length=214, Percent_Identity=28.0373831775701, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324820, Length=322, Percent_Identity=28.5714285714286, Blast_Score=109, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6322227, Length=263, Percent_Identity=23.574144486692, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI45554248, Length=288, Percent_Identity=34.0277777777778, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24640117, Length=288, Percent_Identity=34.0277777777778, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24586328, Length=286, Percent_Identity=33.2167832167832, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI28573296, Length=247, Percent_Identity=36.4372469635627, Blast_Score=143, Evalue=1e-34, Organism=Drosophila melanogaster, GI22024069, Length=283, Percent_Identity=34.2756183745583, Blast_Score=142, Evalue=2e-34, Organism=Drosophila melanogaster, GI19921754, Length=281, Percent_Identity=34.8754448398576, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI161076371, Length=249, Percent_Identity=31.7269076305221, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI20129347, Length=255, Percent_Identity=30.1960784313725, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI24656154, Length=249, Percent_Identity=33.7349397590361, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI19922628, Length=249, Percent_Identity=33.7349397590361, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI45553409, Length=286, Percent_Identity=30.4195804195804, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI24647948, Length=286, Percent_Identity=30.4195804195804, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI24647946, Length=286, Percent_Identity=30.4195804195804, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI24647931, Length=310, Percent_Identity=27.4193548387097, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI21358495, Length=207, Percent_Identity=27.536231884058, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.3.1.33
Molecular weight: Translated: 34223; Mature: 34092
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATNLKNRNSNWTISDIPNLDGKTVFITGANSGLGYYTAKALAEKNAHVVLACRTLEKA CCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEHHHHHH NSALHKLKSLNPEGKFTPIELDLADLNKVSEIGSKISTEFEKLDLLINNAGIMHPPKTLS HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PQGFEIQFAVNHLAHMLLTLKFLPLIEKQKGSRIVTVTSGAQFFGKVGWNNLKAENYYNK CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHH WESYANSKLANVMFALELNEKLEQKHILSLAAHPGIAKTNLFSAQKPKPNPIEIFSLELF HHHHHCCHHHHEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHH SPIFQSAEMGALPQLFAATSPQAKGGEHYGPKFNFRGHPKLSPASPFATNKKERKSLWEK HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH SMEILSNFL HHHHHHHCC >Mature Secondary Structure TATNLKNRNSNWTISDIPNLDGKTVFITGANSGLGYYTAKALAEKNAHVVLACRTLEKA CCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEHHHHHH NSALHKLKSLNPEGKFTPIELDLADLNKVSEIGSKISTEFEKLDLLINNAGIMHPPKTLS HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PQGFEIQFAVNHLAHMLLTLKFLPLIEKQKGSRIVTVTSGAQFFGKVGWNNLKAENYYNK CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHH WESYANSKLANVMFALELNEKLEQKHILSLAAHPGIAKTNLFSAQKPKPNPIEIFSLELF HHHHHCCHHHHEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHH SPIFQSAEMGALPQLFAATSPQAKGGEHYGPKFNFRGHPKLSPASPFATNKKERKSLWEK HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH SMEILSNFL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: chlorophyllide a; NADP+
Specific reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8383668 [H]