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The map label for this gene is 123966750

Identifier: 123966750

GI number: 123966750

Start: 1350625

End: 1351416

Strand: Direct

Name: 123966750

Synonym: P9515_15171

Alternate gene names: NA

Gene position: 1350625-1351416 (Clockwise)

Preceding gene: 123966749

Following gene: 123966751

Centisome position: 79.25

GC content: 29.42

Gene sequence:

>792_bases
ATGATTGACTTAAAGGAATTATTAATAAACTCAAATTACAAAAAAGAAATTGAGGAATTAATAAATATTTCTAATTTATC
TTTAAAACATTGGGTAACGTATTGGACAGGGTTTAATTCAACATTTGTATGTGAAGAGATTTTGAAAGAATTTGAAAATT
TAAATGATTTTAAATTTTTTGTTTTTGGAGGATATCCCTCAGCCCAAAAATCCAAGATTGCATGTTTCAGAGAAGATAAT
GTCCCAGATGAAAATGAACTAATAAAAAATTTTCCCGCAAAAGGTATTCTAATGAAAGGCAATTTTTTATTTGATAATGC
AACTCAGGATGATTTCAGATCTTTACTAAGGGATAACGGTCTAATTGAAGAGAGAATTGGTGATATTTGGACTACAGGAG
ACAGAGGAGCTCAAGGAATAATCGATGATTCAAAAATTGAAGACTTAAATGAAAAAGTTTTCTTCCTAAGAGATGTAAAA
GTAAAAATACAAATAGTTGATTTAGATTCATTACAAATACCGGTTGGAAGATCACAAAAACTAATTAATACCGTAGAGGC
TTCAACAAGATTAGATGCAATAGCTTCAGCAGGTTTTAGGATCTCTCGGACCAAAATATTAGAAAGAATAGAAACTGGAA
TGCTTAAATTAAATGGTAAGACTGTTAAGAAAGGTACTATTAGTTTAAAGGTTGGAGACAAAGTTCAGCTTGATAACAAG
GGGTTTGTTGAAATTCTAGATTTGGAAATGACAAAAAGAGAAAGATGGAAAATTAAGTTAATTAGAAAATGA

Upstream 100 bases:

>100_bases
GAAATGGCTTGTTCTTCTCGAAAACCAAATAGGTACTGAATTACCTTGGGCTTTAATAAAACAATCAGAACCAAGAGACA
TAATTTTTATAGAAAGCTAA

Downstream 100 bases:

>100_bases
ATACTCAAGCTGCTATTTTCATATAGGGAGCTCAAATATTTGACTTTTGCTAAAAGGGCGATTAGCTCAGCGGTAGAGCA
TTACCTCGACAAGGTAGTGG

Product: S4-like domain-containing protein

Products: NA

Alternate protein names: S4 Domain-Containing Protein; S4-Like Domain-Containing Protein; Photosystem II S4 Domain-Containing Protein

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIDLKELLINSNYKKEIEELINISNLSLKHWVTYWTGFNSTFVCEEILKEFENLNDFKFFVFGGYPSAQKSKIACFREDN
VPDENELIKNFPAKGILMKGNFLFDNATQDDFRSLLRDNGLIEERIGDIWTTGDRGAQGIIDDSKIEDLNEKVFFLRDVK
VKIQIVDLDSLQIPVGRSQKLINTVEASTRLDAIASAGFRISRTKILERIETGMLKLNGKTVKKGTISLKVGDKVQLDNK
GFVEILDLEMTKRERWKIKLIRK

Sequences:

>Translated_263_residues
MIDLKELLINSNYKKEIEELINISNLSLKHWVTYWTGFNSTFVCEEILKEFENLNDFKFFVFGGYPSAQKSKIACFREDN
VPDENELIKNFPAKGILMKGNFLFDNATQDDFRSLLRDNGLIEERIGDIWTTGDRGAQGIIDDSKIEDLNEKVFFLRDVK
VKIQIVDLDSLQIPVGRSQKLINTVEASTRLDAIASAGFRISRTKILERIETGMLKLNGKTVKKGTISLKVGDKVQLDNK
GFVEILDLEMTKRERWKIKLIRK
>Mature_263_residues
MIDLKELLINSNYKKEIEELINISNLSLKHWVTYWTGFNSTFVCEEILKEFENLNDFKFFVFGGYPSAQKSKIACFREDN
VPDENELIKNFPAKGILMKGNFLFDNATQDDFRSLLRDNGLIEERIGDIWTTGDRGAQGIIDDSKIEDLNEKVFFLRDVK
VKIQIVDLDSLQIPVGRSQKLINTVEASTRLDAIASAGFRISRTKILERIETGMLKLNGKTVKKGTISLKVGDKVQLDNK
GFVEILDLEMTKRERWKIKLIRK

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30244; Mature: 30244

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLKELLINSNYKKEIEELINISNLSLKHWVTYWTGFNSTFVCEEILKEFENLNDFKFF
CCCHHHHHHCCCHHHHHHHHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
VFGGYPSAQKSKIACFREDNVPDENELIKNFPAKGILMKGNFLFDNATQDDFRSLLRDNG
EEECCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEECCEEECCCCHHHHHHHHHCCC
LIEERIGDIWTTGDRGAQGIIDDSKIEDLNEKVFFLRDVKVKIQIVDLDSLQIPVGRSQK
CHHHHHCCEECCCCCCCCCCCCCCHHHHCCCEEEEEEEEEEEEEEEECCCEECCCCCCHH
LINTVEASTRLDAIASAGFRISRTKILERIETGMLKLNGKTVKKGTISLKVGDKVQLDNK
HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCEEEECCEEEECCEEEEEECCEEEECCC
GFVEILDLEMTKRERWKIKLIRK
CCEEEEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MIDLKELLINSNYKKEIEELINISNLSLKHWVTYWTGFNSTFVCEEILKEFENLNDFKFF
CCCHHHHHHCCCHHHHHHHHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
VFGGYPSAQKSKIACFREDNVPDENELIKNFPAKGILMKGNFLFDNATQDDFRSLLRDNG
EEECCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEECCEEECCCCHHHHHHHHHCCC
LIEERIGDIWTTGDRGAQGIIDDSKIEDLNEKVFFLRDVKVKIQIVDLDSLQIPVGRSQK
CHHHHHCCEECCCCCCCCCCCCCCHHHHCCCEEEEEEEEEEEEEEEECCCEECCCCCCHH
LINTVEASTRLDAIASAGFRISRTKILERIETGMLKLNGKTVKKGTISLKVGDKVQLDNK
HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCEEEECCEEEECCEEEEEECCEEEECCC
GFVEILDLEMTKRERWKIKLIRK
CCEEEEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA