| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966749
Identifier: 123966749
GI number: 123966749
Start: 1350058
End: 1350624
Strand: Direct
Name: 123966749
Synonym: P9515_15161
Alternate gene names: NA
Gene position: 1350058-1350624 (Clockwise)
Preceding gene: 123966744
Following gene: 123966750
Centisome position: 79.22
GC content: 30.34
Gene sequence:
>567_bases TTGACTAAAAGTATAGTGATATTTAATGAGCTAGAAAAATGCCTTGATCTTTTAAATGTTTTTAAAGATAAGTCAGTATT TCTTGAAGAAACTTTATTAATAGTGCCATCTAAAGAAAAAATAACTCCCGATCAACAACAATTATTAAATTCATCGAAAA ATAGCTTTTTTAGATCTGATGAAATAGAAAACATAAGAATCCTAAATCCAAAACTTGATAGAAAGATTAGACAAAAAAAC ATGAGCATCTGGCTTATGCCATTTGGATTTATAGCAGGCATAGCATTTTCCAACATGACAAACTTATCCACTTTTAGCTT CCTAGGATTAAATAATATAGGCGAATCCTTCATAGGGGGTATTTTGGGTATGGGCTCAGGATATTTAGGTAGCATTGTAT CTTCAGCAAGTATCAATCTTAATAGGAATAAAGAGTTGAAATCTATTATTGATTTCAATAAAGAGGGGAAATGGCTTGTT CTTCTCGAAAACCAAATAGGTACTGAATTACCTTGGGCTTTAATAAAACAATCAGAACCAAGAGACATAATTTTTATAGA AAGCTAA
Upstream 100 bases:
>100_bases TAAAGAGTTGTTCTTTAATTTTTTACTTTAACTTAATCTATAGTAGAGATATCTTATTTTTTTTATTTGAATCAACAAAC CAACATTTGAGGAATGAAAA
Downstream 100 bases:
>100_bases ATGATTGACTTAAAGGAATTATTAATAAACTCAAATTACAAAAAAGAAATTGAGGAATTAATAAATATTTCTAATTTATC TTTAAAACATTGGGTAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTKSIVIFNELEKCLDLLNVFKDKSVFLEETLLIVPSKEKITPDQQQLLNSSKNSFFRSDEIENIRILNPKLDRKIRQKN MSIWLMPFGFIAGIAFSNMTNLSTFSFLGLNNIGESFIGGILGMGSGYLGSIVSSASINLNRNKELKSIIDFNKEGKWLV LLENQIGTELPWALIKQSEPRDIIFIES
Sequences:
>Translated_188_residues MTKSIVIFNELEKCLDLLNVFKDKSVFLEETLLIVPSKEKITPDQQQLLNSSKNSFFRSDEIENIRILNPKLDRKIRQKN MSIWLMPFGFIAGIAFSNMTNLSTFSFLGLNNIGESFIGGILGMGSGYLGSIVSSASINLNRNKELKSIIDFNKEGKWLV LLENQIGTELPWALIKQSEPRDIIFIES >Mature_187_residues TKSIVIFNELEKCLDLLNVFKDKSVFLEETLLIVPSKEKITPDQQQLLNSSKNSFFRSDEIENIRILNPKLDRKIRQKNM SIWLMPFGFIAGIAFSNMTNLSTFSFLGLNNIGESFIGGILGMGSGYLGSIVSSASINLNRNKELKSIIDFNKEGKWLVL LENQIGTELPWALIKQSEPRDIIFIES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21293; Mature: 21162
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSIVIFNELEKCLDLLNVFKDKSVFLEETLLIVPSKEKITPDQQQLLNSSKNSFFRSD CCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCC EIENIRILNPKLDRKIRQKNMSIWLMPFGFIAGIAFSNMTNLSTFSFLGLNNIGESFIGG CCCEEEEECCHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCHHEECCCHHHHHHHHHH ILGMGSGYLGSIVSSASINLNRNKELKSIIDFNKEGKWLVLLENQIGTELPWALIKQSEP HHHCCCCHHHHHHHHCEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCC RDIIFIES CCEEEEEC >Mature Secondary Structure TKSIVIFNELEKCLDLLNVFKDKSVFLEETLLIVPSKEKITPDQQQLLNSSKNSFFRSD CCEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCC EIENIRILNPKLDRKIRQKNMSIWLMPFGFIAGIAFSNMTNLSTFSFLGLNNIGESFIGG CCCEEEEECCHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCHHEECCCHHHHHHHHHH ILGMGSGYLGSIVSSASINLNRNKELKSIIDFNKEGKWLVLLENQIGTELPWALIKQSEP HHHCCCCHHHHHHHHCEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCC RDIIFIES CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA