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The map label for this gene is yjfH [C]

Identifier: 123966693

GI number: 123966693

Start: 1295246

End: 1296136

Strand: Reverse

Name: yjfH [C]

Synonym: P9515_14601

Alternate gene names: 123966693

Gene position: 1296136-1295246 (Counterclockwise)

Preceding gene: 123966697

Following gene: 123966692

Centisome position: 76.06

GC content: 30.98

Gene sequence:

>891_bases
ATGTATTTAACATCAAAATTATCCTTAATTATTATAGAAAATATTTATCCAAAAATCACTAGTAAAAGTAATGCTTTAGT
TAAAAGATTTAGATCATTTAAAAAAGGATCTAATACAAAAGATAAAGATTATTTTTGTATTGAAGGCACTCATTTGATCG
AAGAAATTATTAAGTCTGGTAATTATCCTTCAAAAATTTTAACTACTGAAAAATGGCTTTATAAAAATGAGGAACTTTCA
CAAAAATTTGATCCATCTTTAATAATTGTCGTTTCAGAAGAAGTTTTAGCGTCAGCAGTGTCCACAAAAAATCCAGATGG
AGTAGCAGCTTTGGTGCAGAGTTCATCAATACTTAATTTTGAAATTAATAATGAAGATGACTTTATGCTAGTTCTTGATA
GGATACAAGATCCCGGGAATATGGGGAACCTTTTTAGAACAGCTTTAGCTGCTGGGGTTAACAAGGTTTTATTGGCAGGA
GGGGCGAATCCATTAGGGCAAAAGGTATTAAGAGCTTCTAGTGGATCTGTTTTTCATCTACCATTTAAAAGATTTGATGG
AGGTGAAGAAGAAATAATTAATTCATTATTGACGTCATTAGATCAATTTTCGAAAAATGGGTTTCAAATAATTTCTACAA
GTAGCCATAATAAAAATCCTGATAAATCTCAAAAACCGTATTGGGAAATTGATTGGTCTAAACCAACTGCACTTATATTG
GGTAATGAAGGTAATGGGATTCATGAAAGAATTCAAGAAGCTTTTACTGAAACAATTACTATTCCGCATAGTGAGCTTGT
AGAATCATTGAATGTGGCTTGTGTTGCAGTTCCGTTATTACTTGAACGAAAAAGAGTCGCATATATTTCTAATTCAAGAA
TACAAAAGTGA

Upstream 100 bases:

>100_bases
TAACGTGTAGAATATTAAGTAATAGTAAAGGGTATAGATATAATTTGCTAAGAATTAAGATTTTAAAAAAATAATTGATC
AAAATATTTAAGTAACTAAG

Downstream 100 bases:

>100_bases
CTGATTTAAATTTTGACTTTGATTTAATAGTAATTGGCGCAGGGTATGGAGGGTTTGATGCAGCCAAACATGCTGCAGGC
AAAGGTCTTAAAGTTGCTAT

Product: tRNA/rRNA methyltransferase (SpoU)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MYLTSKLSLIIIENIYPKITSKSNALVKRFRSFKKGSNTKDKDYFCIEGTHLIEEIIKSGNYPSKILTTEKWLYKNEELS
QKFDPSLIIVVSEEVLASAVSTKNPDGVAALVQSSSILNFEINNEDDFMLVLDRIQDPGNMGNLFRTALAAGVNKVLLAG
GANPLGQKVLRASSGSVFHLPFKRFDGGEEEIINSLLTSLDQFSKNGFQIISTSSHNKNPDKSQKPYWEIDWSKPTALIL
GNEGNGIHERIQEAFTETITIPHSELVESLNVACVAVPLLLERKRVAYISNSRIQK

Sequences:

>Translated_296_residues
MYLTSKLSLIIIENIYPKITSKSNALVKRFRSFKKGSNTKDKDYFCIEGTHLIEEIIKSGNYPSKILTTEKWLYKNEELS
QKFDPSLIIVVSEEVLASAVSTKNPDGVAALVQSSSILNFEINNEDDFMLVLDRIQDPGNMGNLFRTALAAGVNKVLLAG
GANPLGQKVLRASSGSVFHLPFKRFDGGEEEIINSLLTSLDQFSKNGFQIISTSSHNKNPDKSQKPYWEIDWSKPTALIL
GNEGNGIHERIQEAFTETITIPHSELVESLNVACVAVPLLLERKRVAYISNSRIQK
>Mature_296_residues
MYLTSKLSLIIIENIYPKITSKSNALVKRFRSFKKGSNTKDKDYFCIEGTHLIEEIIKSGNYPSKILTTEKWLYKNEELS
QKFDPSLIIVVSEEVLASAVSTKNPDGVAALVQSSSILNFEINNEDDFMLVLDRIQDPGNMGNLFRTALAAGVNKVLLAG
GANPLGQKVLRASSGSVFHLPFKRFDGGEEEIINSLLTSLDQFSKNGFQIISTSSHNKNPDKSQKPYWEIDWSKPTALIL
GNEGNGIHERIQEAFTETITIPHSELVESLNVACVAVPLLLERKRVAYISNSRIQK

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 32963; Mature: 32963

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLTSKLSLIIIENIYPKITSKSNALVKRFRSFKKGSNTKDKDYFCIEGTHLIEEIIKSG
CEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHCC
NYPSKILTTEKWLYKNEELSQKFDPSLIIVVSEEVLASAVSTKNPDGVAALVQSSSILNF
CCCCHHCCHHHHHHCCHHHHHHCCCCEEEEECHHHHHHHHHCCCCCHHHHHEECCCEEEE
EINNEDDFMLVLDRIQDPGNMGNLFRTALAAGVNKVLLAGGANPLGQKVLRASSGSVFHL
EECCCCCEEEEEEHHCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEE
PFKRFDGGEEEIINSLLTSLDQFSKNGFQIISTSSHNKNPDKSQKPYWEIDWSKPTALIL
CHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEE
GNEGNGIHERIQEAFTETITIPHSELVESLNVACVAVPLLLERKRVAYISNSRIQK
ECCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MYLTSKLSLIIIENIYPKITSKSNALVKRFRSFKKGSNTKDKDYFCIEGTHLIEEIIKSG
CEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHCC
NYPSKILTTEKWLYKNEELSQKFDPSLIIVVSEEVLASAVSTKNPDGVAALVQSSSILNF
CCCCHHCCHHHHHHCCHHHHHHCCCCEEEEECHHHHHHHHHCCCCCHHHHHEECCCEEEE
EINNEDDFMLVLDRIQDPGNMGNLFRTALAAGVNKVLLAGGANPLGQKVLRASSGSVFHL
EECCCCCEEEEEEHHCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEE
PFKRFDGGEEEIINSLLTSLDQFSKNGFQIISTSSHNKNPDKSQKPYWEIDWSKPTALIL
CHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEE
GNEGNGIHERIQEAFTETITIPHSELVESLNVACVAVPLLLERKRVAYISNSRIQK
ECCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]