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The map label for this gene is sodN [H]

Identifier: 123966688

GI number: 123966688

Start: 1291366

End: 1291839

Strand: Direct

Name: sodN [H]

Synonym: P9515_14551

Alternate gene names: 123966688

Gene position: 1291366-1291839 (Clockwise)

Preceding gene: 123966687

Following gene: 123966689

Centisome position: 75.78

GC content: 35.02

Gene sequence:

>474_bases
ATGTTAACTAAATTATTAAATTCTTTTTTAAATAAAAATTCTAAATTGGAAGTTCATGCTCATTGTGACGGGCCATGTGG
CGTTTATGATCCCGCTTCTGCAAGAGTTGCTGCAGAAGCAGTATTGGCAATGACCAAGAAGCTTCTTGCGCTTACTCCTC
CTTCAAGTACTGACTCGGGAGATTGGGCTGCTTACAGTAATACCTTTTCCAGGTTTGTCGCAGTTAAAGAAGAACAGGCT
AAAGAAACTAAAAAAGAAATTTTAATTTTGTGGACAGATTATTTCAAGCCAGTTCACTTAGAAACTTATCCAGAACTATA
TGAGACAATTTGGAAAGCAGCAAAATTATGTAGTGCTTGCAAAGTAAATATCGATTTAACTCAAGCAGAAGAGTTAATGA
ATTATGTAGAAAAAATACATACTATTTTTTGGGAATCTAAAGGAAGAAGTGATGCTTTCGTAAAAGCAAGCTAG

Upstream 100 bases:

>100_bases
AAGTTGAATTATTAAAAGTCAATTAAAGTAAGAAATAACATCCAAAACTTTTCAATTTAGTTAAACAACAAGTAAGATAT
ATTCAGTTATACAAAAACGA

Downstream 100 bases:

>100_bases
TTTATCATTTTAAAAAACTTTTTAGATTTAATTGCATTTTTTTTCGGATTAAGAAAAACAGCAATTGTATGCGGTAATTC
TATGCTTCCTACTTTAAAAG

Product: putative nickel-containing superoxide dismutase precursor (NISOD)

Products: NA

Alternate protein names: NiSOD; Nickel-containing superoxide dismutase [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLTKLLNSFLNKNSKLEVHAHCDGPCGVYDPASARVAAEAVLAMTKKLLALTPPSSTDSGDWAAYSNTFSRFVAVKEEQA
KETKKEILILWTDYFKPVHLETYPELYETIWKAAKLCSACKVNIDLTQAEELMNYVEKIHTIFWESKGRSDAFVKAS

Sequences:

>Translated_157_residues
MLTKLLNSFLNKNSKLEVHAHCDGPCGVYDPASARVAAEAVLAMTKKLLALTPPSSTDSGDWAAYSNTFSRFVAVKEEQA
KETKKEILILWTDYFKPVHLETYPELYETIWKAAKLCSACKVNIDLTQAEELMNYVEKIHTIFWESKGRSDAFVKAS
>Mature_157_residues
MLTKLLNSFLNKNSKLEVHAHCDGPCGVYDPASARVAAEAVLAMTKKLLALTPPSSTDSGDWAAYSNTFSRFVAVKEEQA
KETKKEILILWTDYFKPVHLETYPELYETIWKAAKLCSACKVNIDLTQAEELMNYVEKIHTIFWESKGRSDAFVKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nickel superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014123 [H]

Pfam domain/function: PF09055 Sod_Ni [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 17652; Mature: 17652

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKLLNSFLNKNSKLEVHAHCDGPCGVYDPASARVAAEAVLAMTKKLLALTPPSSTDSG
CHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCC
DWAAYSNTFSRFVAVKEEQAKETKKEILILWTDYFKPVHLETYPELYETIWKAAKLCSAC
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
KVNIDLTQAEELMNYVEKIHTIFWESKGRSDAFVKAS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
>Mature Secondary Structure
MLTKLLNSFLNKNSKLEVHAHCDGPCGVYDPASARVAAEAVLAMTKKLLALTPPSSTDSG
CHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCC
DWAAYSNTFSRFVAVKEEQAKETKKEILILWTDYFKPVHLETYPELYETIWKAAKLCSAC
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
KVNIDLTQAEELMNYVEKIHTIFWESKGRSDAFVKAS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8836134 [H]